RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 PARS2Q7L3T8 475 aaKnown RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 GAS2L3Q86XJ1 694 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 TP53INP2Q8IXH6 220 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 BAHD1Q8TBE0 780 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SKA1Q96BD8 255 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 FAF2Q96CS3 445 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 CELF6Q96J87 481 aaKnown RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 ZNF599Q96NL3 588 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 ZDHHC6Q9H6R6 413 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 TM7SF3Q9NS93 570 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 CTTNBP2NLQ9P2B4 639 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 UBA2Q9UBT2 640 aaPredicted RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 WASF3Q9UPY6 502 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 FNDC3AQ9Y2H6 1198 aaKnown RBP13.4□□□□□ -0.26
SMAD3-213ENST00000560175 SPEGQ15772 3267 aa13.4□□□□□ -0.26
SMAD3-213ENST00000560175 LRRK1Q38SD2 2015 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 A0A1W2PQU0 124 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 TLR4O00206 839 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 KRIT1O00522 736 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 TSPAN6O43657 245 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 MAFKO60675 156 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 IGSF6O95976 241 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 ABL2P42684 1182 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 RXRGP48443 463 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 NOVA1P51513 510 aaKnown RBP13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SUOXP51687 545 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 HADHBP55084 474 aaKnown RBP13.39□□□□□ -0.27
SMAD3-213ENST00000560175 TAS2R40P59535 323 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 RHOAP61586 193 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SHBQ15464 509 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 TMCO4Q5TGY1 634 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 FBXL19Q6PCT2 694 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 GDPD4Q6W3E5 623 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 ARHGAP36Q6ZRI8 547 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 GLRX5Q86SX6 157 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 CPNE8Q86YQ8 564 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 LRRC49Q8IUZ0 686 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 RHOT2Q8IXI1 618 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 DEFB124Q8NES8 71 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 OR6K2Q8NGY2 324 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 FAM174AQ8TBP5 190 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 HSPH1Q92598 858 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 FEM1CQ96JP0 617 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 KLHL32Q96NJ5 620 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 LENG8Q96PV6 779 aaPredicted RBP13.39□□□□□ -0.27
SMAD3-213ENST00000560175 PSKH2Q96QS6 385 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 C1QTNF2Q9BXJ5 285 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 DEF6Q9H4E7 631 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SLC32A1Q9H598 525 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SPTLC3Q9NUV7 552 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 IPO11Q9UI26 975 aaKnown RBP13.39□□□□□ -0.27
SMAD3-213ENST00000560175 HS3ST3A1Q9Y663 406 aa13.39□□□□□ -0.27
SMAD3-213ENST00000560175 SHROOM3Q8TF72 1996 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 A0A1B0GTQ1 180 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ZNF487B1APH4 448 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 H0Y8X5 98 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 INSIG1O15503 277 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 SH3BP5O60239 455 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 BUB1BO60566 1050 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 UGT2B4P06133 528 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 CD48P09326 243 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 TIMP2P16035 220 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 CR2P20023 1033 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 MAT2AP31153 395 aaKnown RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ZNF75DP51815 510 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 NXPH1P58417 271 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 RPS21P63220 83 aaKnown RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 SHC2P98077 582 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 DPYSL3Q14195 570 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 FGL2Q14314 439 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 PAFAH1B3Q15102 231 aaKnown RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 PDK2Q15119 407 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 TMCO3Q6UWJ1 677 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 LAYNQ6UX15 382 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ABI3BPQ7Z7G0 1075 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 VSIG1Q86XK7 387 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 SPATS2Q86XZ4 545 aaKnown RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 TSEN2Q8NCE0 465 aaKnown RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ECHDC3Q96DC8 303 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 NSMCE3Q96MG7 304 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ZNF641Q96N77 438 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 TUBGCP5Q96RT8 1024 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 KLF6Q99612 283 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 SLC17A9Q9BYT1 436 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 SUV39H2Q9H5I1 410 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 GPR27Q9NS67 375 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 PCOLCE2Q9UKZ9 415 aa13.38□□□□□ -0.27
SMAD3-213ENST00000560175 COL5A1P20908 1838 aaPredicted RBP13.38□□□□□ -0.27
SMAD3-213ENST00000560175 KCNK3O14649 394 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 MAGEC1O60732 1142 aa13.37□□□□□ -0.27
SMAD3-213ENST00000560175 PALMO75781 387 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms