RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 INTS2Q9H0H0 1204 aaKnown RBP20.09■□□□□ 0.81
RABGGTA-214ENST00000560163 WDCPQ9H6R7 721 aa20.09■□□□□ 0.81
RABGGTA-214ENST00000560163 ITM2BQ9Y287 266 aa20.09■□□□□ 0.81
RABGGTA-214ENST00000560163 PCDHGA4Q9Y5G9 962 aa20.09■□□□□ 0.81
RABGGTA-214ENST00000560163 BECN2A8MW95 431 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 AREL1O15033 823 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 CD44P16070 742 aaKnown RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 WT1P19544 449 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 OR1E1P30953 314 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 THOP1P52888 689 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 CCL7P80098 99 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 LVRNQ6Q4G3 990 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 ZNF783Q6ZMS7 281 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 JAMLQ86YT9 394 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 TRIM59Q8IWR1 403 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 FMR1NBQ8N0W7 255 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 ARL10Q8N8L6 244 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 ZNF397Q8NF99 534 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 CCDC74AQ96AQ1 378 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 PGAP3Q96FM1 320 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 CCDC34Q96HJ3 373 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 DHTKD1Q96HY7 919 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 GTPBP4Q9BZE4 634 aaKnown RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 SCAND2PQ9GZW5 306 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 SYNDIG1Q9H7V2 258 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 TMPRSS4Q9NRS4 437 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 WDR70Q9NW82 654 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 ANKMY1Q9P2S6 941 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 HECAQ9UBI9 543 aaPredicted RBP20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 PCDHGC3Q9UN70 934 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 ACTL7AQ9Y615 435 aa20.08■□□□□ 0.81
RABGGTA-214ENST00000560163 UTP20O75691 2785 aaKnown RBP20.08■□□□□ 0.8
RABGGTA-214ENST00000560163 ERBB2P04626 1255 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 GKP32189 559 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 DNA2P51530 1060 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 SLC6A3Q01959 620 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 FAXCQ5TGI0 409 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 TTI2Q6NXR4 508 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 MACC1Q6ZN28 852 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 DTX1Q86Y01 620 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 KYQ8NBH2 561 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 HTR3CQ8WXA8 447 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 ISG20Q96AZ6 181 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 SPON2Q9BUD6 331 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 STRADBQ9C0K7 418 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 ZDHHC6Q9H6R6 413 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 MBNL1Q9NR56 388 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 GULP1Q9UBP9 304 aa20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 FCF1Q9Y324 198 aaKnown RBP20.07■□□□□ 0.8
RABGGTA-214ENST00000560163 CXorf51AA0A1B0GTR3 108 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 TOR1BO14657 336 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 PSMA7O14818 248 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 NTRK1P04629 796 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 EIF4A3P38919 411 aaKnown RBP20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 PPARDQ03181 441 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 TLE1Q04724 770 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 ZFP36L1Q07352 338 aaKnown RBP20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 ZNF805Q5CZA5 627 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 LRRC31Q6UY01 552 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 SDR16C5Q8N3Y7 309 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 FSTL5Q8N475 847 aaPredicted RBP20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 TMEM74Q96NL1 305 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 SLC25A18Q9H1K4 315 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 GEMIN8Q9NWZ8 242 aaKnown RBP20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 RRN3Q9NYV6 651 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 PISDQ9UG56 409 aa20.06■□□□□ 0.8
RABGGTA-214ENST00000560163 NEMP1O14524 444 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 RPLP0P05388 317 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 HK3P52790 923 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 MARSP56192 900 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 CLCA4Q14CN2 919 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 ACBD5Q5T8D3 534 aaPredicted RBP20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 FOXR2Q6PJQ5 311 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 ENOSF1Q7L5Y1 443 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 VASH2Q86V25 355 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 VPS36Q86VN1 386 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 PASD1Q8IV76 773 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 HSCBQ8IWL3 235 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 TP53I13Q8NBR0 393 aaPredicted RBP20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 PCDH19Q8TAB3 1148 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 FUCA2Q9BTY2 467 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 CPEB1Q9BZB8 566 aaKnown RBP20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 LRRN3Q9H3W5 708 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 ATP13A1Q9HD20 1204 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 SEPT10Q9P0V9 454 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 LOXL2Q9Y4K0 774 aa20.05■□□□□ 0.8
RABGGTA-214ENST00000560163 PRAMEF33A0A0G2JMD5 474 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 PRAMEF10O60809 474 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 PPFIA2O75334 1257 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 JMJD7P0C870 316 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 ITIH1P19827 911 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 CYP4F2P78329 520 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 GNA12Q03113 381 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 UBAP2LQ14157 1087 aaKnown RBP20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 ELOCQ15369 112 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 PTPN20Q4JDL3 420 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 MANEAQ5SRI9 462 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 GJB7Q6PEY0 223 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 ZFAND4Q86XD8 727 aa20.04■□□□□ 0.8
RABGGTA-214ENST00000560163 SCG3Q8WXD2 468 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms