RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC35C1Q96A29 364 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 MED15Q96RN5 788 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 GOLPH3LQ9H4A5 285 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 THAP9Q9H5L6 903 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 HPSEQ9Y251 543 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 ITM2BQ9Y287 266 aa13.03□□□□□ -0.32
RABGGTA-213ENST00000560127 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 TSPAN6O43657 245 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 PAGE1O75459 146 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 MAPK10P53779 464 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 KRT85P78386 507 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 CDK17Q00537 523 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 PPARDQ03181 441 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 NCAPHQ15003 741 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 TCEA2Q15560 299 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 LVRNQ6Q4G3 990 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 MACC1Q6ZN28 852 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 SMYD4Q8IYR2 804 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 DEFB106AQ8N104 65 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 FSTL5Q8N475 847 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 DCAF4L2Q8NA75 395 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 TMEM159Q96B96 161 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 NT5C1BQ96P26 610 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 SLC2A13Q96QE2 648 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 HEPHQ9BQS7 1158 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 TUBD1Q9UJT1 453 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 ANAPC2Q9UJX6 822 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 CFAP45Q9UL16 551 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 DOLKQ9UPQ8 538 aa13.02□□□□□ -0.33
RABGGTA-213ENST00000560127 SLC16A3O15427 465 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 CMA1P23946 247 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 CD82P27701 267 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 EIF4A3P38919 411 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 CCNHP51946 323 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 YPEL5P62699 121 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 ELOCQ15369 112 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 TMPRSS9Q7Z410 1059 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 CCNJLQ8IV13 435 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 ZNF683Q8IZ20 524 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 SCG3Q8WXD2 468 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 EDEM3Q9BZQ6 932 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 CEP44Q9C0F1 390 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 SIK2Q9H0K1 926 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 IGSF5Q9NSI5 407 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 GPR34Q9UPC5 381 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 PLAAQ9Y263 795 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
RABGGTA-213ENST00000560127 SHANK1Q9Y566 2161 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 I6L893 689 aaPredicted RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 M0QYT0 321 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ZMPSTE24O75844 475 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ADCY5O95622 1261 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ALPIP09923 528 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 FMO5P49326 533 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 SERPINH1P50454 418 aaKnown RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 HK3P52790 923 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 CARD16Q5EG05 197 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 RRAGAQ7L523 313 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 SETD3Q86TU7 594 aaPredicted RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 SLITRK4Q8IW52 837 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 PCDH20Q8N6Y1 951 aaKnown RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 Q8N9G6 341 aaPredicted RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 OR7D4Q8NG98 312 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 LMO3Q8TAP4 145 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 RAB7BQ96AH8 199 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 VOPP1Q96AW1 172 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 CMKLR1Q99788 373 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 B3GNT4Q9C0J1 378 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 METTL14Q9HCE5 456 aaKnown RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 LRRC4CQ9HCJ2 640 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ANLNQ9NQW6 1124 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ZNF71Q9NQZ8 489 aaPredicted RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
RABGGTA-213ENST00000560127 KCNK4Q9NYG8 393 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 ACTL7AQ9Y615 435 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 RNF215Q9Y6U7 377 aa13□□□□□ -0.33
RABGGTA-213ENST00000560127 C16orf96A6NNT2 1141 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 NEMP1O14524 444 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 TOR1BO14657 336 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 PMM2O15305 246 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 GRAP2O75791 330 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 GLI1P08151 1106 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 GKP32189 559 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 CCR10P46092 362 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 BLKP51451 505 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 DNA2P51530 1060 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 ARSDP51689 593 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 NDUFA8P51970 172 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 ARF5P84085 180 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 NME3Q13232 169 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 MTA1Q13330 715 aa12.99□□□□□ -0.33
RABGGTA-213ENST00000560127 PDCLQ13371 301 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms