RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 Q6ZSV7 163 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 GALNT7Q86SF2 657 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 MOGAT3Q86VF5 341 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 SCN4BQ8IWT1 228 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 TSPYL6Q8N831 410 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 OR14A16Q8NHC5 309 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 OTUD7AQ8TE49 926 aaPredicted RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 FAM216AQ8WUB2 273 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 HERVK_113Q902F9 699 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 RSRC1Q96IZ7 334 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 MAELQ96JY0 434 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 APOLD1Q96LR9 279 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 TEFMQ96QE5 360 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 GFM1Q96RP9 751 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 NUDT16L1Q9BRJ7 211 aaKnown RBP3.97□□□□□ -1.77
SPG11-218ENST00000559754 SAYSD1Q9NPB0 183 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 SMYD2Q9NRG4 433 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 TXLNGQ9NUQ3 528 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 SEL1LQ9UBV2 794 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 CDH22Q9UJ99 828 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 PCDHGB1Q9Y5G3 927 aa3.97□□□□□ -1.77
SPG11-218ENST00000559754 MST1RQ04912 1400 aa3.96□□□□□ -1.77
SPG11-218ENST00000559754 BTBD18B2RXH4 712 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 B9A039 149 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 SEPT4O43236 478 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 FAM155BO75949 473 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 TBX18O95935 607 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 RPN1P04843 607 aaKnown RBP3.96□□□□□ -1.78
SPG11-218ENST00000559754 CYP4B1P13584 511 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 LIFRP42702 1097 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 PPP3CCP48454 512 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 PAPOLAP51003 745 aaKnown RBP3.96□□□□□ -1.78
SPG11-218ENST00000559754 PMS2P54278 862 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 TMPRSS3P57727 454 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 KRTAP10-6P60371 365 aaPredicted RBP3.96□□□□□ -1.78
SPG11-218ENST00000559754 TRPC3Q13507 836 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 HLFQ16534 295 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 SLC45A4Q5BKX6 768 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 C9orf50Q5SZB4 431 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 CREB3L2Q70SY1 520 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 GALNT5Q7Z7M9 940 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 FTSJ3Q8IY81 847 aaKnown RBP3.96□□□□□ -1.78
SPG11-218ENST00000559754 SCAMP5Q8TAC9 235 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 CEP76Q8TAP6 659 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 ADAMTS14Q8WXS8 1223 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 RFFLQ8WZ73 363 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 LMLNQ96KR4 655 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 TRAPPC9Q96Q05 1148 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 LMAN2LQ9H0V9 348 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 RMI1Q9H9A7 625 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 IRAK4Q9NWZ3 460 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 NSMCE4AQ9NXX6 385 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 NKIRAS2Q9NYR9 191 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 OSGIN2Q9Y236 505 aa3.96□□□□□ -1.78
SPG11-218ENST00000559754 DENND3A2RUS2 1198 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 HSPB6O14558 160 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 SYN3O14994 580 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 LDB2O43679 373 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 PLOD3O60568 738 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 TFRCP02786 760 aaKnown RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 ATP1A3P13637 1013 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CHN1P15882 459 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 NAGAP17050 411 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CST5P28325 142 aaPredicted RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 RFC1P35251 1148 aaPredicted RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 SKIV2L2P42285 1042 aaKnown RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 AMTP48728 403 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 MCM2P49736 904 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 TUBP50607 506 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 TERF1P54274 439 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 DCAF7P61962 342 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 PKP1Q13835 747 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 PLCB4Q15147 1175 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CCNG2Q16589 344 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 TIGD6Q17RP2 521 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CCDC30Q5VVM6 783 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 MON1BQ7L1V2 547 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 RNF144BQ7Z419 303 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 SERPINA11Q86U17 422 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 WDR5BQ86VZ2 330 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 HEATR4Q86WZ0 1026 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 TMC8Q8IU68 726 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CPOQ8IVL8 374 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 HERC6Q8IVU3 1022 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 CLIP4Q8N3C7 705 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 NKAIN3Q8N8D7 197 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 LSMEM1Q8N8F7 131 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 FSIP1Q8NA03 581 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 RUBCNQ92622 972 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 HTRA1Q92743 480 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 SDCCAG3Q96C92 435 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 RTP4Q96DX8 246 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 BARD1Q99728 777 aaKnown RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 CHCHD6Q9BRQ6 235 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 ABHD16BQ9H3Z7 469 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 PRKRIP1Q9H875 184 aaPredicted RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 SEPSECSQ9HD40 501 aaKnown RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 OLA1Q9NTK5 396 aaKnown RBP3.95□□□□□ -1.78
SPG11-218ENST00000559754 KLQ9UEF7 1012 aa3.95□□□□□ -1.78
SPG11-218ENST00000559754 SRP68Q9UHB9 627 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms