RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 ADNPQ9H2P0 1102 aa10.96□□□□□ -0.65
TRAF3-207ENST00000559734 LRRC4CQ9HCJ2 640 aa10.96□□□□□ -0.65
TRAF3-207ENST00000559734 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.65
TRAF3-207ENST00000559734 ACTL7AQ9Y615 435 aa10.96□□□□□ -0.65
TRAF3-207ENST00000559734 AHCTF1Q8WYP5 2266 aa10.96□□□□□ -0.66
TRAF3-207ENST00000559734 TRPM6Q9BX84 2022 aa10.96□□□□□ -0.66
TRAF3-207ENST00000559734 TRIM49BA6NDI0 452 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 C9orf172C9J069 976 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 MED7O43513 233 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 HSP90AA1P07900 732 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 ALPIP09923 528 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 OR1E1P30953 314 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 SERPINH1P50454 418 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 ATP1A2P50993 1020 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 BLKP51451 505 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 FKBP3Q00688 224 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 CETN1Q12798 172 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 SERINC3Q13530 473 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 CCDC40Q4G0X9 1142 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 RETSATQ6NUM9 610 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 TMEM110Q86TL2 294 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 SETD3Q86TU7 594 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 PCDH20Q8N6Y1 951 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 CXorf40AQ8TE69 158 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 SLC2A13Q96QE2 648 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 GTPBP4Q9BZE4 634 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 EDEM3Q9BZQ6 932 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 METTL14Q9HCE5 456 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 ATP13A1Q9HD20 1204 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 ZNF71Q9NQZ8 489 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 MBNL1Q9NR56 388 aaKnown RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 MPP6Q9NZW5 540 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 HECAQ9UBI9 543 aaPredicted RBP10.95□□□□□ -0.66
TRAF3-207ENST00000559734 HPSEQ9Y251 543 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 RNF215Q9Y6U7 377 aa10.95□□□□□ -0.66
TRAF3-207ENST00000559734 ZFC3H1O60293 1989 aaKnown RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 A0A1W2PQ27 194 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 A0A1W2PQ64 194 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 A0A1W2PQC6 194 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 C16orf96A6NNT2 1141 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 KRIT1O00522 736 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 MMP20O60882 483 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 HSF2BPO75031 334 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ZNF821O75541 412 aaPredicted RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 TM7SF2O76062 418 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 UGT2B4P06133 528 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 GNA15P30679 374 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 CASRP41180 1078 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 PRCPP42785 496 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 CCR10P46092 362 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 HK3P52790 923 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 PMS1P54277 932 aaKnown RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 YPEL5P62699 121 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 MTA1Q13330 715 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ALG11Q2TAA5 492 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 EFHC1Q5JVL4 640 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 TMEM164Q5U3C3 297 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ANKRD40Q6AI12 368 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ATL3Q6DD88 541 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ENPP7Q6UWV6 458 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 LRRC31Q6UY01 552 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 KRBA2Q6ZNG9 492 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 FAM183BPQ6ZVS7 135 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 GKN2Q86XP6 184 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 DTX1Q86Y01 620 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 PASD1Q8IV76 773 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 IL22RA1Q8N6P7 574 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 RAB7BQ96AH8 199 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 TMEM159Q96B96 161 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 CENPTQ96BT3 561 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 KREMEN1Q96MU8 473 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 EPAS1Q99814 870 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 WRAP53Q9BUR4 548 aaKnown RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 C1QTNF7Q9BXJ2 289 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 SLC12A9Q9BXP2 914 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 CEP44Q9C0F1 390 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 WDCPQ9H6R7 721 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ACP6Q9NPH0 428 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 ANLNQ9NQW6 1124 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 AKAP7Q9P0M2 348 aaPredicted RBP10.94□□□□□ -0.66
TRAF3-207ENST00000559734 PLAAQ9Y263 795 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 COL12A1Q99715 3063 aa10.94□□□□□ -0.66
TRAF3-207ENST00000559734 B4DGG1 531 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 STMND1H3BQB6 276 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 SRGAP2O75044 1071 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 DAB1O75553 588 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 RASGRP1O95267 797 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 GLI1P08151 1106 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 CD82P27701 267 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 SULT1E1P49888 294 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 ARF5P84085 180 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 PKP1Q13835 747 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 ARHGEF7Q14155 803 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 IRF4Q15306 451 aa10.93□□□□□ -0.66
TRAF3-207ENST00000559734 KLHL40Q2TBA0 621 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms