RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 RFTN1Q14699 578 aaPredicted RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 MARC1Q5VT66 337 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 PAPD7Q5XG87 772 aaKnown RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 TTC27Q6P3X3 843 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 METTL3Q86U44 580 aaKnown RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 KBTBD6Q86V97 674 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 SLC41A1Q8IVJ1 513 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 ZNF567Q8N184 647 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 TFB1MQ8WVM0 346 aaKnown RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 PRCCQ92733 491 aaPredicted RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 TADA1Q96BN2 335 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 KLHL32Q96NJ5 620 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 AGAP3Q96P47 875 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 NUDCD1Q96RS6 583 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 SEMA3CQ99985 751 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 NEUROG2Q9H2A3 272 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 ZSCAN32Q9NX65 697 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 ITM2BQ9Y287 266 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 VPS13AQ96RL7 3174 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 CCDC163A0A0D9SF12 145 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 TSPAN11A1L157 253 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 BCLAF3A2AJT9 711 aaKnown RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 H7C0C1 242 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 KPNA3O00505 521 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 PPP1R12AO14974 1030 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 PRLP01236 227 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 PDHA1P08559 390 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 ETS1P14921 441 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 NFKB1P19838 968 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 C5AR1P21730 350 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 ATP5OP48047 213 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 KCNJ1P48048 391 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 CSNK1DP48730 415 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 SCNN1BP51168 640 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 ETF1P62495 437 aaKnown RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 PPP2CBP62714 309 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 PPP2CAP67775 309 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 SKOR1P84550 965 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 ZNF33AQ06730 810 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 NSUN2Q08J23 767 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM1-217ENST00000559108 OLIG2Q13516 323 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 SNX1Q13596 522 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 TIGD7Q6NT04 549 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 SYT10Q6XYQ8 523 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 CREG2Q8IUH2 290 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 LRRC49Q8IUZ0 686 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 TMIEQ8NEW7 156 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 SPATA22Q8NHS9 363 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 CCDC110Q8TBZ0 833 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 GAB3Q8WWW8 586 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 HTR3CQ8WXA8 447 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 NKD2Q969F2 451 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 ECHDC3Q96DC8 303 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 TOE1Q96GM8 510 aaKnown RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 OXNAD1Q96HP4 312 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 TEKT5Q96M29 485 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 C16orf45Q96MC5 204 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 NAPGQ99747 312 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 ORAI3Q9BRQ5 295 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 TMEM121Q9BTD3 319 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 MLPHQ9BV36 600 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 AP1M1Q9BXS5 423 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 CPEB1Q9BZB8 566 aaKnown RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 C6orf106Q9H6K1 298 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 FBRSQ9HAH7 460 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 EBF2Q9HAK2 575 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 FBXL12Q9NXK8 326 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 WSB2Q9NYS7 404 aaPredicted RBP11.02□□□□□ -0.65
TPM1-217ENST00000559108 PCDHGC4Q9Y5F7 938 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 SDK1Q7Z5N4 2213 aa11.02□□□□□ -0.65
TPM1-217ENST00000559108 ADAMTS9Q9P2N4 1935 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 C16orf96A6NNT2 1141 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 KCNN4O15554 427 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 FZD6O60353 706 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 RNASEH2AO75792 299 aaKnown RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 RPP40O75818 363 aaKnown RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 ALDH1A2O94788 518 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 POP4O95707 220 aaKnown RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 MT-CYBP00156 380 aaPredicted RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 DNTTP04053 509 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TIMP2P16035 220 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 ITGB7P26010 798 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 PTGER3P43115 390 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 ADPRHP54922 357 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 RALGDSQ12967 914 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 LPAL2Q16609 132 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 LONRF2Q1L5Z9 754 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 PLK5Q496M5 336 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TEX44Q53QW1 395 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 ZNF805Q5CZA5 627 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 CCDC181Q5TID7 509 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 KDELC1Q6UW63 502 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 GDPD4Q6W3E5 623 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.01□□□□□ -0.65
TPM1-217ENST00000559108 KDM7AQ6ZMT4 941 aa11.01□□□□□ -0.65
TPM1-217ENST00000559108 TAB3Q8N5C8 712 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms