RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 RTL10Q7L3V2 364 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DNAJB7Q7Z6W7 309 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TBC1D26Q86UD7 250 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 IGFN1Q86VF2 1251 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 SNX32Q86XE0 403 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DNAAF5Q86Y56 855 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 LINC00346Q8IVM7 164 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CCDC13Q8IYE1 715 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 SCML4Q8N228 414 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TTC30BQ8N4P2 665 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ZCCHC9Q8N567 271 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 LINC01465Q8N7H1 131 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MCUQ8NE86 351 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 OR52N4Q8NGI2 321 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NEK9Q8TD19 979 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NSMCE1Q8WV22 266 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 FAR1Q8WVX9 515 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PSPC1Q8WXF1 523 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ATOH1Q92858 354 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 VPS33AQ96AX1 596 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MOAP1Q96BY2 351 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PABPC5Q96DU9 382 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MMABQ96EY8 250 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 VMP1Q96GC9 406 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PGAM5Q96HS1 289 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 GBP5Q96PP8 586 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TEFMQ96QE5 360 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 GCNAQ96QF7 691 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ABHD1Q96SE0 405 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MAP7D2Q96T17 732 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 THAP7Q9BT49 309 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MLST8Q9BVC4 326 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 STRA6Q9BX79 667 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 OR10A4Q9H209 315 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 NDST4Q9H3R1 872 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ZNF703Q9H7S9 590 aaPredicted RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CPNE5Q9HCH3 593 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 BPIFA1Q9NP55 256 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ATP8A2Q9NTI2 1148 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 SPATS2LQ9NUQ6 558 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 GIMAP4Q9NUV9 329 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ARHGEF38Q9NXL2 777 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ASIC5Q9NY37 505 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 OGFRQ9NZT2 677 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DKK2Q9UBU2 259 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 FBXL17Q9UF56 701 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CARD8Q9Y2G2 431 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 R3HDM2Q9Y2K5 976 aaKnown RBP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.41□□□□□ -2.02
GABPB1-209ENST00000559100 TRPV2Q9Y5S1 764 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 MAST3O60307 1309 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 ADGRF5Q8IZF2 1346 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 PASKQ96RG2 1323 aa2.41□□□□□ -2.02
GABPB1-209ENST00000559100 CYP2D7A0A087X1C5 515 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 A0A1W2PRG0 241 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 DDTLA6NHG4 134 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 LRRC72A6NJI9 287 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 A6NL46 340 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 TAF4O00268 1085 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 CHL1O00533 1208 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 INPPL1O15357 1258 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 ADAM20O43506 726 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 GPC4O75487 556 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 ESRRBO95718 433 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 DDAH2O95865 285 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 MT-CYBP00156 380 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 TFP02787 698 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 HEXAP06865 529 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 ABCB1P08183 1280 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 SRPRAP08240 638 aaKnown RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 CD63P08962 238 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 MYBL1P10243 752 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 TFPIP10646 304 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 GABRB1P18505 474 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 EPHB2P29323 1055 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 OAS2P29728 719 aaKnown RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 IDUAP35475 653 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 PLA2G5P39877 138 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 MSH2P43246 934 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 TNNT3P45378 269 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 GABRB2P47870 512 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 CAMPP49913 170 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 CLCN5P51795 746 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 CLCNKBP51801 687 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 HDAC4P56524 1084 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 PLIN5Q00G26 463 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 RHAGQ02094 409 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 ZBTB16Q05516 673 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 PMPCAQ10713 525 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 COG2Q14746 738 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 RNPS1Q15287 305 aaKnown RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 C9orf152Q5JTZ5 239 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 GARNL3Q5VVW2 1013 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 KIAA0895LQ68EN5 471 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 KIAA0930Q6ICG6 404 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 LRRC8EQ6NSJ5 796 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 GRASPQ7Z6J2 395 aaPredicted RBP2.4□□□□□ -2.03
GABPB1-209ENST00000559100 SLFN11Q7Z7L1 901 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 AMIGO2Q86SJ2 522 aa2.4□□□□□ -2.03
GABPB1-209ENST00000559100 WDR5BQ86VZ2 330 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms