RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 ZNF805Q5CZA5 627 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 HORMAD1Q86X24 394 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ARHGAP12Q8IWW6 846 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 NPWQ8N729 165 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ACRBPQ8NEB7 543 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 RAB7BQ96AH8 199 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 GDAP1L1Q96MZ0 367 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 CAMK1GQ96NX5 476 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ELF4Q99607 663 aaPredicted RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.41□□□□□ -0.58
BMP4-204ENST00000558961 ZDHHC6Q9H6R6 413 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ERVMER34-1Q9H9K5 563 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 AASDHPPTQ9NRN7 309 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 TRMT1Q9NXH9 659 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 HECAQ9UBI9 543 aaPredicted RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 LHX3Q9UBR4 397 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 PCSK1NQ9UHG2 260 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 ZFR2Q9UPR6 939 aaKnown RBP11.41□□□□□ -0.58
BMP4-204ENST00000558961 FADS3Q9Y5Q0 445 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 LRRK1Q38SD2 2015 aa11.41□□□□□ -0.58
BMP4-204ENST00000558961 PTPRBP23467 1997 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 RCCD1A6NED2 376 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 YKT6O15498 198 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 SPINT1O43278 529 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 MAGEC1O60732 1142 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 PRAMEF11O60813 436 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 DKK1O94907 266 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 POP4O95707 220 aaKnown RBP11.4□□□□□ -0.58
BMP4-204ENST00000558961 TCF4P15884 667 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 ERCC2P18074 760 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 MAT2AP31153 395 aaKnown RBP11.4□□□□□ -0.58
BMP4-204ENST00000558961 ABL2P42684 1182 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 SIM1P81133 766 aaPredicted RBP11.4□□□□□ -0.58
BMP4-204ENST00000558961 SHBQ15464 509 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 MYLK3Q32MK0 819 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 BOLA3Q53S33 107 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 SLC45A4Q5BKX6 768 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 KIAA1161Q6NSJ0 714 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 OXR1Q8N573 874 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 FAM71BQ8TC56 605 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 TEKT4Q8WW24 435 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 ARHGEF26Q96DR7 871 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 NUP85Q9BW27 656 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
BMP4-204ENST00000558961 GDF3Q9NR23 364 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 CWC15Q9P013 229 aaKnown RBP11.4□□□□□ -0.58
BMP4-204ENST00000558961 DKK3Q9UBP4 350 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 IP6K2Q9UHH9 426 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 ANAPC7Q9UJX3 599 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 PCDHA13Q9Y5I0 950 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 CABIN1Q9Y6J0 2220 aa11.4□□□□□ -0.58
BMP4-204ENST00000558961 SPAARA0A1B0GVQ0 90 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 A0A1W2PQU0 124 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TSPAN11A1L157 253 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 ARHGAP42A6NI28 874 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 C16orf96A6NNT2 1141 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 BTNL10A8MVZ5 291 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TLR4O00206 839 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 KRIT1O00522 736 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 AREL1O15033 823 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 FANCGO15287 622 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TRIM16O95361 564 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 IGSF6O95976 241 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 HNRNPA2B1P22626 353 aaKnown RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 GKP32189 559 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 GRK6P43250 576 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 RXRGP48443 463 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 DNA2P51530 1060 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 VAV2P52735 878 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 RHOAP61586 193 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 GRM3Q14832 879 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 SUZ12Q15022 739 aaKnown RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 CYTH1Q15438 398 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TRIP6Q15654 476 aaKnown RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 PPP6R3Q5H9R7 873 aaPredicted RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 CCDC122Q5T0U0 273 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 ATXN7L2Q5T6C5 722 aaPredicted RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 FBXL19Q6PCT2 694 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 LEKR1Q6ZMV7 388 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 KANSL1Q7Z3B3 1105 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 POLNQ7Z5Q5 900 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 ABI3BPQ7Z7G0 1075 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 SPATS2Q86XZ4 545 aaKnown RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 LZTR1Q8N653 840 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 KNL1Q8NG31 2342 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 OR6K2Q8NGY2 324 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 FAM174AQ8TBP5 190 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 ASB12Q8WXK4 309 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TSC1Q92574 1164 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 CNTNAP3BQ96NU0 1288 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 TMEM121BQ9BXQ6 578 aaPredicted RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 CNTNAP3Q9BZ76 1288 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 SLC39A8Q9C0K1 460 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 LACRTQ9GZZ8 138 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
BMP4-204ENST00000558961 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
BMP4-204ENST00000558961 RCOR3Q9P2K3 495 aaPredicted RBP11.39□□□□□ -0.59
BMP4-204ENST00000558961 UBA2Q9UBT2 640 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms