RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 TRAFD1O14545 582 aaPredicted RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 TSPAN3O60637 253 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 KLHL41O60662 606 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 ZNF189O75820 626 aaPredicted RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 ZMPSTE24O75844 475 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 RTN3O95197 1032 aaPredicted RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 ANP32DO95626 131 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 CD1EP15812 388 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 TACR2P21452 398 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 HTR7P34969 479 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 IDH3AP50213 366 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SGSHP51688 502 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 NDST2P52849 883 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SESN3P58005 492 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 TAS2R39P59534 338 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 HNRNPDQ14103 355 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 RPS27LQ71UM5 84 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 DENND1CQ8IV53 801 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 FSTL5Q8N475 847 aaPredicted RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 TEX9Q8N6V9 391 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM1-210ENST00000558264 RBM15BQ8NDT2 890 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 OR6P1Q8NGX9 317 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 MAPK15Q8TD08 544 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SH3RF2Q8TEC5 729 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SMIM14Q96QK8 99 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SEMA3CQ99985 751 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SPON2Q9BUD6 331 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 VN1R3Q9BXE9 311 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 C1QTNF1Q9BXJ1 281 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 TREX1Q9NSU2 369 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 CLIC5Q9NZA1 410 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 IL37Q9NZH6 218 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 XPR1Q9UBH6 696 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 FAM92AA1XBS5 289 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 WASH4PA8MWX3 477 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 PEX11AO75192 247 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 CSPG5O95196 566 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SLC8A1P32418 973 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 VEGFBP49765 207 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SERPINH1P50454 418 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 NAGLUP54802 743 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 NRG1Q02297 640 aaPredicted RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 KPNB1Q14974 876 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 SLC9B1Q4ZJI4 515 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SIRPB2Q5JXA9 342 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 SNX30Q5VWJ9 437 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 NEPROQ6NW34 567 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 POTEHQ6S545 545 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 KLHDC8BQ8IXV7 354 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 BLOC1S5Q8TDH9 187 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 WDR60Q8WVS4 1066 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 AUTS2Q8WXX7 1259 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 BHMTQ93088 406 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 NUDCD1Q96RS6 583 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 CCDC106Q9BWC9 280 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 HIPK3Q9H422 1215 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 ELAC1Q9H777 363 aaKnown RBP10.67□□□□□ -0.7
TPM1-210ENST00000558264 ZNF212Q9UDV6 495 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 FBXO5Q9UKT4 447 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
TPM1-210ENST00000558264 IGLV3-10A0A075B6K4 115 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SEC24AO95486 1093 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 STMN1P16949 149 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 GRIA4P48058 902 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ALDH7A1P49419 539 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 LBRQ14739 615 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 KHDC1Q4VXA5 237 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 CFAP157Q5JU67 520 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SPOUT1Q5T280 376 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 KIAA1841Q6NSI8 718 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ANKS3Q6ZW76 656 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 TMEM151AQ8N4L1 468 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 CCNYL1Q8N7R7 359 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ARRDC2Q8TBH0 407 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 NSMCE1Q8WV22 266 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 WBP2Q969T9 261 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 TSNARE1Q96NA8 513 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 OLFM1Q99784 485 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 WDR55Q9H6Y2 383 aaPredicted RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 COG4Q9H9E3 785 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 CYP4F12Q9HCS2 524 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SMPD4Q9NXE4 827 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 MARCH4Q9P2E8 410 aaPredicted RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 APOBEC2Q9Y235 224 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 FIS1Q9Y3D6 152 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ARL5AQ9Y689 179 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 ZFP37Q9Y6Q3 630 aaPredicted RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 LOC100653049A0A140TA62 436 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 AP3B1O00203 1094 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 TBC1D4O60343 1298 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 TRIM13O60858 407 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 SIN3BO75182 1162 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 KRT34O76011 436 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 IGLV3-27P01718 113 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 PRSS56P0CW18 603 aa10.66□□□□□ -0.7
TPM1-210ENST00000558264 EZRP15311 586 aaKnown RBP10.66□□□□□ -0.7
TPM1-210ENST00000558264 GRK2P25098 689 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms