RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 ZFC3H1O60293 1989 aaKnown RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 SCN8AQ9UQD0 1980 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SYNJ2BP-COX16A0A087WUM0 186 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 PRAMEF33A0A0G2JMD5 474 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 A0A1W2PQM1 296 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 D6RAR5 112 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 STMND1H3BQB6 276 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 K7ERQ8 282 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RNF225M0QZC1 329 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 CAPN5O15484 640 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 ZW10O43264 779 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 WIPF1O43516 503 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SMAD6O43541 496 aaKnown RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 SNAP91O60641 907 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 PRAMEF10O60809 474 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 ENDOD1O94919 500 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 IGLV3-25P01717 112 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RHOCP08134 193 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 GLI1P08151 1106 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 PNLIPP16233 465 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 ITIH1P19827 911 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RRM1P23921 792 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 BRD2P25440 801 aaKnown RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 ITGB7P26010 798 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 GPD2P43304 727 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 PEX5P50542 639 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 DNA2P51530 1060 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 POLE2P56282 527 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CENPCQ03188 943 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 ZFP36L1Q07352 338 aaKnown RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 CETN1Q12798 172 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 EIF4EBP2Q13542 120 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 C5orf22Q49AR2 442 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CBWD6Q4V339 395 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CARD16Q5EG05 197 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 DCAF17Q5H9S7 520 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 CBWD3Q5JTY5 395 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 EFHC1Q5JVL4 640 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CBWD5Q5RIA9 395 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 ATL3Q6DD88 541 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RETSATQ6NUM9 610 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 LRRC31Q6UY01 552 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 TMEM110Q86TL2 294 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SETD3Q86TU7 594 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 CCNJLQ8IV13 435 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 RBFAQ8N0V3 343 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 IL22RA1Q8N6P7 574 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 UBR7Q8N806 425 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 Q8N9G6 341 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 OR52K2Q8NGK3 314 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SPATA20Q8TB22 786 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 GRIN3AQ8TCU5 1115 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 STK32AQ8WU08 396 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 HTR3CQ8WXA8 447 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CENPTQ96BT3 561 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 NT5C1BQ96P26 610 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 LRRC61Q9BV99 259 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 EDEM3Q9BZQ6 932 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CEP44Q9C0F1 390 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SLC6A16Q9GZN6 736 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CLPBQ9H078 707 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SIK2Q9H0K1 926 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CDH19Q9H159 772 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 TNKS2Q9H2K2 1166 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 TCEAL2Q9H3H9 227 aaPredicted RBP5.27□□□□□ -1.57
SPG11-208ENST00000558155 FAM204AQ9H8W3 233 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 TMEM51Q9NW97 253 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 DDIT4Q9NX09 232 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 COX16Q9P0S2 106 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 SIRPGQ9P1W8 387 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 VPS51Q9UID3 782 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 APPL1Q9UKG1 709 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 VANGL2Q9ULK5 521 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 ADGRG1Q9Y653 693 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 WASF2Q9Y6W5 498 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 CREBBPQ92793 2442 aa5.27□□□□□ -1.57
SPG11-208ENST00000558155 LRRK1Q38SD2 2015 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 RCCD1A6NED2 376 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 C16orf96A6NNT2 1141 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ZNF891A8MT65 544 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 C9orf172C9J069 976 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 AGRPO00253 132 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 CASC3O15234 703 aaKnown RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 MED7O43513 233 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 PAGE1O75459 146 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TM7SF2O76062 418 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 RASGRP1O95267 797 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 TNFP01375 233 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 GLB1P16278 677 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 WT1P19544 449 aaPredicted RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 CMA1P23946 247 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HTR1BP28222 390 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 ETV5P41161 510 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 HK3P52790 923 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 SNX16P57768 344 aa5.26□□□□□ -1.57
SPG11-208ENST00000558155 FKBP3Q00688 224 aaKnown RBP5.26□□□□□ -1.57
SPG11-208ENST00000558155 NME3Q13232 169 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms