RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 ADH1BP00325 375 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 UGT2B4P06133 528 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 ITGAVP06756 1048 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 CR2P20023 1033 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 KCNJ1P48048 391 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 ANGPT1Q15389 498 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 TTC31Q49AM3 519 aaPredicted RBP21.52■■□□□ 1.04
CASC4-204ENST00000557945 NCEH1Q6PIU2 408 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 GDPD4Q6W3E5 623 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 GSTA5Q7RTV2 222 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 RASSF3Q86WH2 238 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 PAF1Q8N7H5 531 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 LRIG1Q96JA1 1093 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 CPEB1Q9BZB8 566 aaKnown RBP21.52■■□□□ 1.04
CASC4-204ENST00000557945 ATP13A3Q9H7F0 1226 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 GLOD4Q9HC38 313 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 DYRK4Q9NR20 520 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 EBF1Q9UH73 591 aa21.52■■□□□ 1.04
CASC4-204ENST00000557945 KMT2EQ8IZD2 1858 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 F5H423 210 aaPredicted RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 PDE2AO00408 941 aaPredicted RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 AXIN1O15169 862 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 GALR2O43603 387 aaPredicted RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 IFNB1P01574 187 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 C5AR1P21730 350 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 CES1P23141 567 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 HOXA6P31267 233 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 STIP1P31948 543 aaKnown RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 FNTBP49356 437 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 NUBP1P53384 320 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 GDF10P55107 478 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 ZBTB16Q05516 673 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 BCL2L1Q07817 233 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 NIPAL4Q0D2K0 466 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 GRM3Q14832 879 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 RALGPS1Q5JS13 557 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 CAMK1DQ8IU85 385 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 CCDC110Q8TBZ0 833 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 SPATA13Q96N96 652 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 TUBGCP5Q96RT8 1024 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 OMDQ99983 421 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 OSBPL1AQ9BXW6 950 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 PABPC3Q9H361 631 aaKnown RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 RSPH14Q9UHP6 348 aa21.51■■□□□ 1.03
CASC4-204ENST00000557945 DRG1Q9Y295 367 aaKnown RBP21.51■■□□□ 1.03
CASC4-204ENST00000557945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.5■■□□□ 1.03
CASC4-204ENST00000557945 C5orf60A6NFR6 353 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ESPNB1AK53 854 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 NFKB1P19838 968 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 SERPINA4P29622 427 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 CD68P34810 354 aaPredicted RBP21.5■■□□□ 1.03
CASC4-204ENST00000557945 METAP1P53582 386 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ANKRD20A2Q5SQ80 823 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 CFAP58Q5T655 872 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ANKRD20A1Q5TYW2 823 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ANKRD20A3Q5VUR7 823 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ALG1LQ6GMV1 187 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ITPRIPL1Q6GPH6 555 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ARHGEF18Q6ZSZ5 1173 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 CCDC89Q8N998 374 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 ARRDC2Q8TBH0 407 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 PPP1R16AQ96I34 528 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 KLHL32Q96NJ5 620 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 SLC25A51Q9H1U9 297 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 SCML1Q9UN30 329 aa21.5■■□□□ 1.03
CASC4-204ENST00000557945 A0A1W2PP55 124 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 OPHN1O60890 802 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 PHF2O75151 1096 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 SERPINF2P08697 491 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 TDGF1P13385 188 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 COILP38432 576 aaPredicted RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 CD86P42081 329 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 SFSWAPQ12872 951 aaKnown RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 CYP1B1Q16678 543 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 ZNF805Q5CZA5 627 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 TTC27Q6P3X3 843 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 HDDC3Q8N4P3 179 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 C12orf50Q8NA57 414 aaPredicted RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 PDCD6IPQ8WUM4 868 aaKnown RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 ARRDC3Q96B67 414 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 IMP4Q96G21 291 aaKnown RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 NSMCE3Q96MG7 304 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 ZNF641Q96N77 438 aaPredicted RBP21.49■■□□□ 1.03
CASC4-204ENST00000557945 RBM15Q96T37 977 aaKnown RBP eCLIP21.49■■□□□ 1.038e-6■■■■■ 30.1
CASC4-204ENST00000557945 SUV39H2Q9H5I1 410 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 FBXL12Q9NXK8 326 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 CDC23Q9UJX2 597 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 NCKAP1Q9Y2A7 1128 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 PCDHGC4Q9Y5F7 938 aa21.49■■□□□ 1.03
CASC4-204ENST00000557945 PLK4O00444 970 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 GCATO75600 419 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 RNASEH2AO75792 299 aaKnown RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 ACTN2P35609 894 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 LMNB2Q03252 620 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 CCDC137Q6PK04 289 aaKnown RBP21.48■■□□□ 1.03
CASC4-204ENST00000557945 FAM124AQ86V42 546 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 LONP2Q86WA8 852 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 AADATQ8N5Z0 425 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 ATL2Q8NHH9 583 aa21.48■■□□□ 1.03
CASC4-204ENST00000557945 SPATA22Q8NHS9 363 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms