RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PARS2Q7L3T8 475 aaKnown RBP14.52□□□□□ -0.09
USP3-205ENST00000557884 ZC3H18Q86VM9 953 aaKnown RBP14.52□□□□□ -0.09
USP3-205ENST00000557884 CAMK1DQ8IU85 385 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 SLC41A1Q8IVJ1 513 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 TEX26Q8N6G2 289 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 SNX19Q92543 992 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 MAML1Q92585 1016 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 P3H4Q92791 437 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 NSMCE3Q96MG7 304 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 FAM118BQ9BPY3 351 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 HINFPQ9BQA5 517 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 RBM22Q9NW64 420 aaKnown RBP eCLIP14.52□□□□□ -0.096e-10■■■■□ 22.8
USP3-205ENST00000557884 NCDNQ9UBB6 729 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 GMEB2Q9UKD1 530 aa14.52□□□□□ -0.09
USP3-205ENST00000557884 NYNRINQ9P2P1 1898 aaKnown RBP14.52□□□□□ -0.09
USP3-205ENST00000557884 CHD5Q8TDI0 1954 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 MEI4A8MW99 385 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 APOC4-APOC2K7ER74 178 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 KCNK3O14649 394 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 FSBPO95073 299 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 APOC2P02655 101 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 HLA-DQB2P05538 268 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 HSPA9P38646 679 aaKnown RBP14.51□□□□□ -0.09
USP3-205ENST00000557884 PLA2G5P39877 138 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 CREB5Q02930 508 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 ZNF33AQ06730 810 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 ZBTB17Q13105 803 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 ZNF805Q5CZA5 627 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 LRRC73Q5JTD7 316 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 LYSMD4Q5XG99 296 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 BZW1Q7L1Q6 419 aaKnown RBP14.51□□□□□ -0.09
USP3-205ENST00000557884 CYP2U1Q7Z449 544 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 TFB1MQ8WVM0 346 aaKnown RBP14.51□□□□□ -0.09
USP3-205ENST00000557884 LRIG1Q96JA1 1093 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 MGME1Q9BQP7 344 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 OSBPL1AQ9BXW6 950 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 HDAC8Q9BY41 377 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 ARRDC1-AS1Q9H2J1 176 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 ATP13A3Q9H7F0 1226 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 C10orf88Q9H8K7 445 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 NOD2Q9HC29 1040 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 SCUBE2Q9NQ36 999 aa14.51□□□□□ -0.09
USP3-205ENST00000557884 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3DA0A087WVF3 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3IA0A087WXS9 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3EA0A087X179 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3KA0A087X1G2 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TCRBV7S2A1N4TA0A589 114 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3FA6NER0 549 aaPredicted RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 LRRC72A6NJI9 287 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 C16orf96A6NNT2 1141 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3LB9A6J9 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 H7C0C1 242 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 GFRA3O60609 400 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TJP3O95049 919 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 EPN2O95208 641 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3HP0C7X1 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 ITPKAP23677 461 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 MAOBP27338 520 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 ATP5OP48047 213 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 CSNK1DP48730 415 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 NEK3P51956 506 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TAS2R38P59533 333 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 AP1S1P61966 158 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 IFI35P80217 286 aaPredicted RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 OTUD4Q01804 1114 aaKnown RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 NSUN2Q08J23 767 aaKnown RBP eCLIP14.5□□□□□ -0.09
USP3-205ENST00000557884 PRKD1Q15139 912 aaPredicted RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 ZNF569Q5MCW4 686 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 CFAP58Q5T655 872 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 SEL1L2Q5TEA6 688 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3GQ6DHY5 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3CQ6IPX1 549 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 FBXL19Q6PCT2 694 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 RGL4Q8IZJ4 473 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TBC1D3Q8IZP1 549 aaPredicted RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 DCLK2Q8N568 766 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 PAF1Q8N7H5 531 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 OR2T34Q8NGX1 318 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 ACTL9Q8TC94 416 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 PIGKQ92643 395 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 FATE1Q969F0 183 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 QKIQ96PU8 341 aaKnown RBP eCLIP14.5□□□□□ -0.091e-15■■■■■ 29.2
USP3-205ENST00000557884 NUDCD1Q96RS6 583 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 TLR10Q9BXR5 811 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 CPEB1Q9BZB8 566 aaKnown RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 POLR1EQ9GZS1 481 aaKnown RBP14.5□□□□□ -0.09
USP3-205ENST00000557884 BRD8Q9H0E9 1235 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 SMOC1Q9H4F8 434 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 SUV39H2Q9H5I1 410 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 EFR3BQ9Y2G0 817 aa14.5□□□□□ -0.09
USP3-205ENST00000557884 ENC1O14682 589 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 SLC7A4O43246 635 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 PLRG1O43660 514 aaKnown RBP14.49□□□□□ -0.09
USP3-205ENST00000557884 RETP07949 1114 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 ADRB3P13945 408 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 ITIH2P19823 946 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 CR2P20023 1033 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 SERPINA4P29622 427 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 MAT2AP31153 395 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms