RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 SERGEFQ9UGK8 458 aa11.62□□□□□ -0.55
LINC00648-204ENST00000557749 FZD10Q9ULW2 581 aa11.62□□□□□ -0.55
LINC00648-204ENST00000557749 SNX10Q9Y5X0 201 aa11.62□□□□□ -0.55
LINC00648-204ENST00000557749 NUMA1Q14980 2115 aa11.62□□□□□ -0.55
LINC00648-204ENST00000557749 TMEM8BA6NDV4 472 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 MEN1O00255 615 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 DAPK3O43293 454 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 KDELR3O43731 214 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 AP1G1O43747 822 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 CREB3O43889 395 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ZMPSTE24O75844 475 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 POP4O95707 220 aaKnown RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 IGSF6O95976 241 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 MT-CO1P00395 513 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 VAV1P15498 845 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 AKT2P31751 481 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 PCK1P35558 622 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 CTSKP43235 329 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 DNA2P51530 1060 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 CCNHP51946 323 aaPredicted RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 NDST2P52849 883 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 GDF10P55107 478 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 RPL7AP62424 266 aaKnown RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 RPS21P63220 83 aaKnown RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ARF5P84085 180 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 PIGHQ14442 188 aaPredicted RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ZSCAN23Q3MJ62 389 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ERMARDQ5T6L9 678 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 TMCO4Q5TGY1 634 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 FBXL19Q6PCT2 694 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 LINGO4Q6UY18 593 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 DPY19L3Q6ZPD9 716 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 LUZP1Q86V48 1076 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 HORMAD1Q86X24 394 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 DCP2Q8IU60 420 aaKnown RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 UMODL1-AS1Q8N2C9 162 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 LZTR1Q8N653 840 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 OR2AP1Q8NGE2 309 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 GRIN3AQ8TCU5 1115 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 SLC6A18Q96N87 628 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ELF4Q99607 663 aaPredicted RBP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.61□□□□□ -0.55
LINC00648-204ENST00000557749 C1QTNF7Q9BXJ2 289 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 ZWILCHQ9H900 591 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 DNAI1Q9UI46 699 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 CAPN11Q9UMQ6 739 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 AP4E1Q9UPM8 1137 aa11.61□□□□□ -0.55
LINC00648-204ENST00000557749 TMEM191CA6NGB0 347 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ARHGAP42A6NI28 874 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 TMCO5BA8MYB1 307 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 C10orf142B7Z368 130 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 TLR4O00206 839 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 TSPAN6O43657 245 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 BUB1O43683 1085 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 LEFTY1O75610 366 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 HCAR3P49019 387 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 CRTC2Q53ET0 693 aaPredicted RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 BOLA3Q53S33 107 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 HS1BP3Q53T59 392 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 PIP5KL1Q5T9C9 394 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 DBX2Q6ZNG2 339 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ZNF571Q7Z3V5 609 aaPredicted RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 RYBPQ8N488 228 aaPredicted RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 FEM1CQ96JP0 617 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ISCUQ9H1K1 167 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 FSCN3Q9NQT6 498 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 HAUS2Q9NVX0 235 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ZNHIT6Q9NWK9 470 aaKnown RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 PCOLCE2Q9UKZ9 415 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 SARDHQ9UL12 918 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 FNDC3AQ9Y2H6 1198 aaKnown RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 NEUROG3Q9Y4Z2 214 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 SNX11Q9Y5W9 270 aa11.6□□□□□ -0.55
LINC00648-204ENST00000557749 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
LINC00648-204ENST00000557749 ADAMTS9Q9P2N4 1935 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 A0A1B0GTQ1 180 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 FAM170AA1A519 330 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 H3BRJ5 948 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 K7ERQ8 282 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 EEF2KO00418 725 aaKnown RBP11.59□□□□□ -0.55
LINC00648-204ENST00000557749 SMAD6O43541 496 aaKnown RBP11.59□□□□□ -0.55
LINC00648-204ENST00000557749 SH3BP5O60239 455 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 PCDH8O95206 1070 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 GJB6O95452 261 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 ADRB3P13945 408 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 HNRNPA2B1P22626 353 aaKnown RBP11.59□□□□□ -0.55
LINC00648-204ENST00000557749 NFKBIAP25963 317 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 PBX1P40424 430 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 ARL4AP40617 200 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 RHOAP61586 193 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 RFTN1Q14699 578 aaPredicted RBP11.59□□□□□ -0.55
LINC00648-204ENST00000557749 ZNF805Q5CZA5 627 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 CFAP58Q5T655 872 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
LINC00648-204ENST00000557749 RHBDD1Q8TEB9 315 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms