RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 CEP44Q9C0F1 390 aa14.65□□□□□ -0.06
ARHGEF40-208ENST00000557498 IL22Q9GZX6 179 aa14.65□□□□□ -0.06
ARHGEF40-208ENST00000557498 UBE2ZQ9H832 354 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF40-208ENST00000557498 ARNT2Q9HBZ2 717 aa14.65□□□□□ -0.06
ARHGEF40-208ENST00000557498 LOC285095A0A1B0GVY8 99 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 TRIM24O15164 1050 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 SMAD6O43541 496 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 OPA1O60313 960 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 ASLP04424 464 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 PGAM1P18669 254 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 POLR2EP19388 210 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 GDI1P31150 447 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 CHRNA4P43681 627 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 STK19P49842 368 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 AP1S1P61966 158 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 CRADDP78560 199 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 ECT2LQ008S8 904 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 HTR4Q13639 388 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 STAT4Q14765 748 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 ATXN7L2Q5T6C5 722 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 STEAP4Q687X5 459 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 TMEM215Q68D42 235 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 CASC4Q6P4E1 433 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 C22orf39Q6P5X5 142 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 C3orf62Q6ZUJ4 267 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 SRLQ86TD4 932 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 SH2D3CQ8N5H7 860 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 IFT43Q96FT9 208 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 NSMCE3Q96MG7 304 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 SH3GL2Q99962 352 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 RPP25Q9BUL9 199 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 TMEM109Q9BVC6 243 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 TRMT61BQ9BVS5 477 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 TM6SF2Q9BZW4 377 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 PLAC1Q9HBJ0 212 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 FAM53CQ9NYF3 392 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 SAMD15Q9P1V8 674 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 NUMBLQ9Y6R0 609 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 MYLKQ15746 1914 aa14.64□□□□□ -0.07
ARHGEF40-208ENST00000557498 MBTPS2O43462 519 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ATP9BO43861 1147 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 IGSF6O95976 241 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 EPOP01588 193 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 IVLP07476 585 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ATXN1LP0C7T5 689 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 TPH1P17752 444 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 HLA-DPA1P20036 260 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 KCNA5P22460 613 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 STX2P32856 288 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 MAPK8P45983 427 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 SLC6A11P48066 632 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 CSNK1DP48730 415 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 VASPP50552 380 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 CDK18Q07002 472 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 SLC1A5Q15758 541 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 CERCAMQ5T4B2 595 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ARMC3Q5W041 872 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 UNC5AQ6ZN44 842 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 KDELC2Q7Z4H8 507 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 CROCCP2Q86T23 111 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 SLC25A41Q8N5S1 370 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 GSDMBQ8TAX9 411 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 FBF1Q8TES7 1133 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ISG20Q96AZ6 181 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 RPL10LQ96L21 214 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 CDX2Q99626 313 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 TRIM56Q9BRZ2 755 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 TDRD1Q9BXT4 1180 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ROPN1BQ9BZX4 212 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ROPN1Q9HAT0 212 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 MED4Q9NPJ6 270 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 DEC1Q9P2X7 70 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ERVW-1Q9UQF0 538 aa14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 ARIH1Q9Y4X5 557 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-208ENST00000557498 TCRBV9S1A1TA0A576 114 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 GOLGA6L10A6NI86 522 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 ARNTLO00327 626 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 ZNF821O75541 412 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 TCEA3O75764 348 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 NDST3O95803 873 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SYF2O95926 243 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 GSRP00390 522 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 FGF1P05230 155 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SRPRAP08240 638 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 CA4P22748 312 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SP100P23497 879 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 GJA4P35212 333 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 OPRD1P41143 372 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 KDSRQ06136 332 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 TRAF2Q12933 501 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SKIV2LQ15477 1246 aaKnown RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 CCDC85BQ15834 202 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 KLHL38Q2WGJ6 581 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 KRT71Q3SY84 523 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 HSP90B2PQ58FF3 399 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SIRPB2Q5JXA9 342 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 DGKKQ5KSL6 1271 aa14.62□□□□□ -0.07
ARHGEF40-208ENST00000557498 SPANXN3Q5MJ09 141 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms