RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 NEXNQ0ZGT2 675 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PMPCAQ10713 525 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PKP1Q13835 747 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 SLC9C1Q4G0N8 1177 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 MIDNQ504T8 468 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 TTLL5Q6EMB2 1281 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 IL20RBQ6UXL0 311 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PTF1AQ7RTS3 328 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PRSS45Q7RTY3 260 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PXKQ7Z7A4 578 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 FAM160B2Q86V87 743 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 CMASQ8NFW8 434 aaPredicted RBP4.93□□□□□ -1.62
PRPF39-212ENST00000557477 GDPD5Q8WTR4 605 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 HDAC7Q8WUI4 952 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 EME1Q96AY2 570 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 PERPQ96FX8 193 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 FAM118BQ9BPY3 351 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 QTRT1Q9BXR0 403 aaKnown RBP4.93□□□□□ -1.62
PRPF39-212ENST00000557477 SPAG4Q9NPE6 437 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 C20orf141Q9NUB4 165 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 MPP6Q9NZW5 540 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 TBC1D14Q9P2M4 693 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 FBXO40Q9UH90 709 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 NLRP1Q9C000 1473 aa4.93□□□□□ -1.62
PRPF39-212ENST00000557477 EHBP1L1Q8N3D4 1523 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 SETD1AO15047 1707 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 VWDEQ8N2E2 1590 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 MST1RQ04912 1400 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 KIAA1107Q9UPP5 1409 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 TRBV5-7A0A0A0MS05 114 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 FSD2A1L4K1 749 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 DPPA5A6NC42 116 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 DDTLA6NHG4 134 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 PPP6CO00743 305 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 RBMXL2O75526 392 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 IL1AP01583 271 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 LDHCP07864 332 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 HSPA1AP0DMV8 641 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 HSPA1BP0DMV9 641 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 EPHB2P29323 1055 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 MAPK4P31152 587 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 CTCFP49711 727 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 ARSFP54793 590 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 RPS3AP61247 264 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 SETQ01105 290 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 SUPT20HL1Q3ZLR7 823 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 ENTPD8Q5MY95 495 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 RRM2BQ7LG56 351 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 TADA2BQ86TJ2 420 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 PRIMA1Q86XR5 153 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 NGEFQ8N5V2 710 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 NOC3LQ8WTT2 800 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 DDB2Q92466 427 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 ZG16BQ96DA0 208 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 CLMNQ96JQ2 1002 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 RANBP17Q9H2T7 1088 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 PAPOLBQ9NRJ5 636 aaKnown RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 TMEM45AQ9NWC5 275 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 KIAA1456Q9P272 454 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 CTNNAL1Q9UBT7 734 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 PLEKHB1Q9UF11 243 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 SWAP70Q9UH65 585 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 CDH22Q9UJ99 828 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 FBXO2Q9UK22 296 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 PSAT1Q9Y617 370 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 COX11Q9Y6N1 276 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 CCDC141Q6ZP82 1450 aa4.92□□□□□ -1.62
PRPF39-212ENST00000557477 COL11A2P13942 1736 aaPredicted RBP4.92□□□□□ -1.62
PRPF39-212ENST00000557477 TRBV5-3A0A0A0MS03 114 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ARHGAP10A1A4S6 786 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CBY3A6NI87 242 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 F8W810 466 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SNAP23O00161 211 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 DOK2O60496 412 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ZBED4O75132 1171 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 BCAR3O75815 825 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 TMCC1O94876 653 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 TSPY4P0CV99 314 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 TSPY10P0CW01 314 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CTSAP10619 480 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 FMO4P31512 558 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 BLKP51451 505 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 RPS13P62277 151 aaKnown RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 GHRHRQ02643 423 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CYP4A11Q02928 519 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ZNF91Q05481 1191 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 SLC18A2Q05940 514 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 FOXD4Q12950 439 aaPredicted RBP4.91□□□□□ -1.62
PRPF39-212ENST00000557477 EDRF1Q3B7T1 1238 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ALG10Q5BKT4 473 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ALG10BQ5I7T1 473 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ITPRIPL1Q6GPH6 555 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CFAP161Q6P656 301 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 AAGABQ6PD74 315 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ZNF793Q6ZN11 406 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 UBE2Q1Q7Z7E8 422 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CNGA4Q8IV77 575 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 ETNPPLQ8TBG4 499 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 CREB3L4Q8TEY5 395 aa4.91□□□□□ -1.62
PRPF39-212ENST00000557477 NELL1Q92832 810 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms