RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KRIT1O00522 736 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 KCNK3O14649 394 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 SLC31A1O15431 190 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TNFSF14O43557 240 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 LILRA1O75019 489 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 GJB6O95452 261 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CDK4P11802 303 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 PSMA2P25787 234 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 NEK3P51956 506 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 RPS21P63220 83 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 DHX9Q08211 1270 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 MAMLD1Q13495 774 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 NR1I3Q14994 352 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 PARP15Q460N3 678 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 INO80DQ53TQ3 878 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TDRD12Q587J7 1177 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FAM72AQ5TYM5 149 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 AGBL4Q5VU57 503 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FAM72DQ6L9T8 149 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 DBX2Q6ZNG2 339 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 GLRX5Q86SX6 157 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ZSCAN30Q86W11 494 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FAM72BQ86X60 149 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CCDC185Q8N715 623 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 RTL3Q8N8U3 475 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ARHGEF2Q92974 986 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 RAB7BQ96AH8 199 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 KLHDC7BQ96G42 594 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CDK15Q96Q40 435 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 OSBPL1AQ9BXW6 950 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ZDHHC6Q9H6R6 413 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ERVMER34-1Q9H9K5 563 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 NEUROG3Q9Y4Z2 214 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 DMXL2Q8TDJ6 3036 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 A0A1B0GTQ1 180 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 A0A1W2PQU0 124 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TMEM8BA6NDV4 472 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 H0Y8X5 98 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 PLK4O00444 970 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CCP110O43303 1012 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 KDELR3O43731 214 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ZMPSTE24O75844 475 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FTH1P19P0C7X4 201 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 XPAP23025 273 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 GLDCP23378 1020 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ITGB7P26010 798 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ACVRL1P37023 503 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 PRKCIP41743 596 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CCNHP51946 323 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ZNF135P52742 658 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TPI1P60174 286 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 SKOR1P84550 965 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 BNC1Q01954 994 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 GRM3Q14832 879 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FIGNQ5HY92 759 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CFAP58Q5T655 872 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ERMARDQ5T6L9 678 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 MANEALQ5VSG8 457 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 LAYNQ6UX15 382 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 UNQ6494/PRO21346Q6UXR6 183 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TTC7BQ86TV6 843 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 NLRP14Q86W24 1093 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 HORMAD1Q86X24 394 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 GALNT15Q8N3T1 639 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CHCHD4Q8N4Q1 142 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 PAF1Q8N7H5 531 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 CHST14Q8NCH0 376 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 OR2AP1Q8NGE2 309 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FBF1Q8TES7 1133 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FAM131CQ96AQ9 280 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 NAP1L5Q96NT1 182 aaPredicted RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 TM6SF2Q9BZW4 377 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ZWILCHQ9H900 591 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 ARHGAP20Q9P2F6 1191 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FTSJ1Q9UET6 329 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 FZD10Q9ULW2 581 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 LUC7L2Q9Y383 392 aaKnown RBP7.45□□□□□ -1.22
SCFD1-222ENST00000556768 MSRB2Q9Y3D2 182 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 SLCO1B1Q9Y6L6 691 aa7.45□□□□□ -1.22
SCFD1-222ENST00000556768 LAMA5O15230 3695 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 EEF2KO00418 725 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 TSPAN6O43657 245 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CBFA2T3O75081 653 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 IGSF6O95976 241 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PROS1P07225 676 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 CTSLP07711 333 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 TPM1P09493 284 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ADRB3P13945 408 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 SPINK2P20155 84 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 HNRNPA2B1P22626 353 aaKnown RBP7.44□□□□□ -1.22
SCFD1-222ENST00000556768 NDST2P52849 883 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 METAP1P53582 386 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 NXPH1P58417 271 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PPP2CBP62714 309 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 PPP2CAP67775 309 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 FAM193AP78312 1265 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ARF5P84085 180 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 IL9RQ01113 521 aa7.44□□□□□ -1.22
SCFD1-222ENST00000556768 ACAP1Q15027 740 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms