RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 PRPF39Q86UA1 669 aaKnown RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 CPNE8Q86YQ8 564 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 KLK6Q92876 244 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 BTBD6Q96KE9 485 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 EXOC2Q96KP1 924 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 ZNF830Q96NB3 372 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 DNAJC7Q99615 494 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 MYOCQ99972 504 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 OSBPL1AQ9BXW6 950 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 GDF3Q9NR23 364 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 GPR27Q9NS67 375 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 CWC15Q9P013 229 aaKnown RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 KLK13Q9UKR3 277 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 MFHAS1Q9Y4C4 1052 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 ANKRD36A6QL64 1941 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 PTPRBP23467 1997 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 LRRK1Q38SD2 2015 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 TPRP12270 2363 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 TSPAN11A1L157 253 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 C16orf96A6NNT2 1141 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 AREL1O15033 823 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 RAD51BO15315 384 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 INSIG1O15503 277 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 DFNA5O60443 496 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 MFAP3LO75121 409 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 PIGNO95427 931 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 IGSF6O95976 241 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 HNRNPA2B1P22626 353 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 GRK6P43250 576 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 RGRP47804 291 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 HCAR3P49019 387 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 PAPOLAP51003 745 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 RHOAP61586 193 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 OVGP1Q12889 678 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ACAP1Q15027 740 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ASTE1Q2TB18 679 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 MYLK3Q32MK0 819 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SLC45A4Q5BKX6 768 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 PPP6R3Q5H9R7 873 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 KIAA1161Q6NSJ0 714 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ALKBH5Q6P6C2 394 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ARHGAP36Q6ZRI8 547 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ABI3BPQ7Z7G0 1075 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SLCO6A1Q86UG4 719 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ZNF354CQ86Y25 554 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 GATAD2AQ86YP4 633 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 TP53INP2Q8IXH6 220 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SLC22A18ASQ8N1D0 253 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 RYBPQ8N488 228 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 OR13H1Q8NG92 308 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SAP25Q8TEE9 199 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SETD7Q8WTS6 366 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 TSC1Q92574 1164 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 GATA6Q92908 595 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SKA1Q96BD8 255 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 KLHL32Q96NJ5 620 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 NUP85Q9BW27 656 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 SCNM1Q9BWG6 230 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 PACSIN1Q9BY11 444 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 CAAP1Q9H8G2 361 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ERVMER34-1Q9H9K5 563 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ETNK2Q9NVF9 386 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 UBA2Q9UBT2 640 aaPredicted RBP10.47□□□□□ -0.73
SHMT2-224ENST00000556737 ANAPC7Q9UJX3 599 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 KNL1Q8NG31 2342 aa10.47□□□□□ -0.73
SHMT2-224ENST00000556737 IGF2RP11717 2491 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 FAM221BA6H8Z2 402 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 SLC31A1O15431 190 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 YKT6O15498 198 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PCDH8O95206 1070 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 TRIM16O95361 564 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 POP4O95707 220 aaKnown RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 RARAP10276 462 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 EIF4A3P38919 411 aaKnown RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 RXRGP48443 463 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 ZNF135P52742 658 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 CLDN2P57739 230 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 RPS21P63220 83 aaKnown RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 CCDC15Q0P6D6 951 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 TBX2Q13207 712 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PIGHQ14442 188 aaPredicted RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 LRRC73Q5JTD7 316 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 CCDC122Q5T0U0 273 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 FBXL19Q6PCT2 694 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 GDPD4Q6W3E5 623 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 KYAT3Q6YP21 454 aaKnown RBP10.46□□□□□ -0.73
SHMT2-224ENST00000556737 KDM7AQ6ZMT4 941 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 POLNQ7Z5Q5 900 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 CHCHD4Q8N4Q1 142 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 OXR1Q8N573 874 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 PNPLA1Q8N8W4 532 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 FAM71BQ8TC56 605 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 TEKT4Q8WW24 435 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 ADAMTS14Q8WXS8 1223 aa10.46□□□□□ -0.73
SHMT2-224ENST00000556737 HSPH1Q92598 858 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms