RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 NLRP9Q7RTR0 991 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 DEFB128Q7Z7B8 93 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 SLCO6A1Q86UG4 719 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ZNF410Q86VK4 478 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 PASD1Q8IV76 773 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 LRRC52Q8N7C0 313 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ENDOVQ8N8Q3 282 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 BANPQ8N9N5 519 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 FBXO36Q8NEA4 188 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 PPP1R14CQ8TAE6 165 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 NSMCE1Q8WV22 266 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 SLC44A1Q8WWI5 657 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ERP27Q96DN0 273 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 SCLYQ96I15 445 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 TNIP3Q96KP6 325 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ACAP3Q96P50 834 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 TMEM121Q9BTD3 319 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 MTMR12Q9C0I1 747 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 C1orf21Q9H246 121 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 TLE6Q9H808 572 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 APOBEC3GQ9HC16 384 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 IL23AQ9NPF7 189 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 MRPL40Q9NQ50 206 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 EIF2B3Q9NR50 452 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ABCF3Q9NUQ8 709 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 SETD4Q9NVD3 440 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 RRN3Q9NYV6 651 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ZNF212Q9UDV6 495 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 ZMYM5Q9UJ78 669 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 R3HDM2Q9Y2K5 976 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 TELO2Q9Y4R8 837 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 LRRC42Q9Y546 428 aa6.26□□□□□ -1.41
CPSF2-205ENST00000556622 MYH9P35579 1960 aaKnown RBP6.26□□□□□ -1.41
CPSF2-205ENST00000556622 SF3B1O75533 1304 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 SLCO1B7G3V0H7 640 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 GOLGA8SH3BPF8 625 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 M0QYV0 167 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 FGF10O15520 208 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 PSPNO60542 156 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 GCATO75600 419 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 PPM1BO75688 479 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 ENDOD1O94919 500 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 IQCF3P0C7M6 154 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 KRT10P13645 584 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 PRKCHP24723 683 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TRHRP34981 398 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RFC1P35251 1148 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RPL22P35268 128 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 THPOP40225 353 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 VHLP40337 213 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 PTPN9P43378 593 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 POLD2P49005 469 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 CDH6P55285 790 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RPL26P61254 145 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 YWHAGP61981 247 aaKnown RBP eCLIP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RPL7AP62424 266 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 AP2B1P63010 937 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 IGBP1P78318 339 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 IRX1P78414 480 aaPredicted RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 SLC25A11Q02978 314 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 DEUP1Q05D60 604 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 E2F5Q15329 346 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TAF11Q15544 211 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 MUM1Q2TAK8 710 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TRMT5Q32P41 509 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 LRIT3Q3SXY7 679 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 CCDC153Q494R4 210 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TMEM240Q5SV17 173 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 METTL21CQ5VZV1 264 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 AAGABQ6PD74 315 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 DPH6Q7L8W6 267 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 OTOP2Q7RTS6 562 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 CLNKQ7Z7G1 428 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 XYLT1Q86Y38 959 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 ECHDC2Q86YB7 292 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 BEST2Q8NFU1 509 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 OR5B17Q8NGF7 314 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 GSDMBQ8TAX9 411 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TCP10LQ8TDR4 215 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 CPT1BQ92523 772 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 JADE3Q92613 823 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TTC17Q96AE7 1141 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 E2F7Q96AV8 911 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 MIEF2Q96C03 454 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 CMTM5Q96DZ9 223 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 NAF1Q96HR8 494 aaKnown RBP6.25□□□□□ -1.41
CPSF2-205ENST00000556622 HPDLQ96IR7 371 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 HSFY1Q96LI6 401 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 ZNF560Q96MR9 790 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 TSNARE1Q96NA8 513 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 KCNC2Q96PR1 638 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RNF157Q96PX1 679 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 NUDCD1Q96RS6 583 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 VAT1Q99536 393 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 SH2D3AQ9BRG2 576 aa6.25□□□□□ -1.41
CPSF2-205ENST00000556622 RNF32Q9H0A6 362 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms