RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 VWA5AO00534 786 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 CREB3O43889 395 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 IFIT1P09914 478 aaKnown RBP4.8□□□□□ -1.64
SCFD1-221ENST00000556534 CDC25AP30304 524 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 GGT5P36269 586 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 EFNB1P98172 346 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 CAPSQ13938 189 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 LPIN1Q14693 890 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 SHBQ15464 509 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 EDRF1Q3B7T1 1238 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 PLEKHO1Q53GL0 409 aaPredicted RBP4.8□□□□□ -1.64
SCFD1-221ENST00000556534 TRILQ7L0X0 811 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 FAM160B2Q86V87 743 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 ESX1Q8N693 406 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 ADAMTS14Q8WXS8 1223 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 ZNF479Q96JC4 524 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 LYZL4Q96KX0 146 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 GFM1Q96RP9 751 aaKnown RBP4.8□□□□□ -1.64
SCFD1-221ENST00000556534 YME1L1Q96TA2 773 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 GTF2A1LQ9UNN4 478 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 CRYL1Q9Y2S2 319 aa4.8□□□□□ -1.64
SCFD1-221ENST00000556534 CLEC18AA5D8T8 446 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HSPB2A8KAH6 182 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 SRD5A1P18405 259 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 EDN2P20800 178 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HOXD3P31249 432 aaPredicted RBP4.79□□□□□ -1.64
SCFD1-221ENST00000556534 LIFRP42702 1097 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 CDKN2AP42771 156 aaKnown RBP4.79□□□□□ -1.64
SCFD1-221ENST00000556534 CXCR3P49682 368 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 CDH15P55291 814 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 MYBPC2Q14324 1141 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HSPB2Q16082 182 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 PRICKLE4Q2TBC4 344 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 FSCBQ5H9T9 825 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 SLC9C2Q5TAH2 1124 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 NAA35Q5VZE5 725 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 MON1BQ7L1V2 547 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HEATR4Q86WZ0 1026 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 PALB2Q86YC2 1186 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 FBXL14Q8N1E6 418 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 CLEC18CQ8NCF0 446 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 CLK4Q9HAZ1 481 aaKnown RBP4.79□□□□□ -1.64
SCFD1-221ENST00000556534 ANKRD10Q9NXR5 420 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HCN3Q9P1Z3 774 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 KIAA1456Q9P272 454 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 HSPB7Q9UBY9 170 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 PCDHGB5Q9Y5G0 923 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 EVPLQ92817 2033 aa4.79□□□□□ -1.64
SCFD1-221ENST00000556534 A0A0U1RQF3 1178 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CCDC196A0A1B0GTZ2 297 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 A0A1B0GVC2 190 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CHL1O00533 1208 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 AGR2O95994 175 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 PTPN2P17706 415 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 TUBP50607 506 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 NUDT6P53370 316 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CLDN2P57739 230 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 YWHAZP63104 245 aaKnown RBP4.78□□□□□ -1.64
SCFD1-221ENST00000556534 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CYP4A11Q02928 519 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CRYZQ08257 329 aaKnown RBP4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CTTNQ14247 550 aaKnown RBP4.78□□□□□ -1.64
SCFD1-221ENST00000556534 GPR68Q15743 365 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 SLC4A8Q2Y0W8 1093 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 SERTAD4-AS1Q5TG53 156 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-221ENST00000556534 TMEM81Q6P7N7 255 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 MIGA1Q8NAN2 632 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 HVCN1Q96D96 273 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 TBATAQ96M53 351 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 AGXT2Q9BYV1 514 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CDT1Q9H211 546 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 SNTG1Q9NSN8 517 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 HIF1ANQ9NWT6 349 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 C9orf78Q9NZ63 289 aaPredicted RBP4.78□□□□□ -1.64
SCFD1-221ENST00000556534 IL1RAPL1Q9NZN1 696 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 IL36RNQ9UBH0 155 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 SLC13A4Q9UKG4 626 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 CKAP5Q14008 2032 aa4.78□□□□□ -1.64
SCFD1-221ENST00000556534 IGHV4-28A0A0C4DH34 117 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 KDM4EB2RXH2 506 aaPredicted RBP4.77□□□□□ -1.65
SCFD1-221ENST00000556534 TNPO2O14787 897 aaKnown RBP4.77□□□□□ -1.65
SCFD1-221ENST00000556534 LDLRAD4O15165 306 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 NGFRP08138 427 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 HOXC6P09630 235 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 SLC2A4P14672 509 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 NAGAP17050 411 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 MYF6P23409 242 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 MLH1P40692 756 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 CLCN5P51795 746 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 EGR4Q05215 589 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 BAK1Q16611 211 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 SFTPA2Q8IWL1 248 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 ZCCHC10Q8TBK6 192 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 ST8SIA4Q92187 359 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 PHF21BQ96EK2 531 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 RNF125Q96EQ8 232 aa4.77□□□□□ -1.65
SCFD1-221ENST00000556534 APOPT1Q96IL0 206 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms