RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 AMY1AP04745 511 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ITGA5P08648 1049 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FAM86B2P0C5J1 330 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RAP2AP10114 183 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 NR2F1P10589 423 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ALAS1P13196 640 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 TNNT1P13805 278 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ATP5F1P24539 256 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 HOXA13P31271 388 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 BMPR1AP36894 532 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 PBX1P40424 430 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 HNF4AP41235 474 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 WASP42768 502 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MTIF2P46199 727 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 PRELPP51888 382 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 SEC24CP53992 1094 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FKBP3Q00688 224 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 UBXN1Q04323 297 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 COASYQ13057 564 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 SPP2Q13103 211 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MTM1Q13496 603 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 COG2Q14746 738 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 EDRF1Q3B7T1 1238 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 C5orf22Q49AR2 442 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 KIAA1755Q5JYT7 1200 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 SNX30Q5VWJ9 437 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 TTI2Q6NXR4 508 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ARMCX5Q6P1M9 558 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 IL27RAQ6UWB1 636 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNF783Q6ZMS7 281 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RAPH1Q70E73 1250 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 PRPF39Q86UA1 669 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 NLRP14Q86W24 1093 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 GPBP1Q86WP2 473 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ARHGEF19Q8IW93 802 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RHOT2Q8IXI1 618 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MYOCDQ8IZQ8 938 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 OR8H3Q8N146 312 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNF619Q8N2I2 560 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 SYT2Q8N9I0 419 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 SLC17A8Q8NDX2 589 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RDM1Q8NG50 284 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 KIF18AQ8NI77 898 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RUBCNQ92622 972 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 DNAJC19Q96DA6 116 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNF845Q96IR2 970 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 ADAM2Q99965 735 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MYOCQ99972 504 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 GDF15Q99988 308 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNF577Q9BSK1 485 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 TIPINQ9BVW5 301 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RPAP3Q9H6T3 665 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 SAYSD1Q9NPB0 183 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNHIT6Q9NWK9 470 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 ANKFY1Q9P2R3 1169 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FBXO40Q9UH90 709 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RPS6KA6Q9UK32 745 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 AGTPBP1Q9UPW5 1226 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 MTF2Q9Y483 593 aaPredicted RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 ACTL7AQ9Y615 435 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 FRMPD4Q14CM0 1322 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
SRP54-211ENST00000556445 RBBP6Q7Z6E9 1792 aaKnown RBP5.37□□□□□ -1.55
SRP54-211ENST00000556445 IGLV3-22A0A075B6J6 115 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 FRMD3A2A2Y4 597 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 E9PMD0 336 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 VWA5AO00534 786 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 PES1O00541 588 aaKnown RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 DYNC1I1O14576 645 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 EIF3DO15371 548 aaKnown RBP eCLIP5.36□□□□□ -1.55
SRP54-211ENST00000556445 SLC16A6O15403 523 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 CALUO43852 315 aaPredicted RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 RAMP2O60895 175 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 ERAL1O75616 437 aaKnown RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 LYPLA2O95372 231 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 TNFRSF6BO95407 300 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SCGB1D1O95968 90 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SPATA31D3P0C874 917 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 JUPP14923 745 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 BRAFP15056 766 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 CYP11B2P19099 503 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 HDCP19113 662 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 PROZP22891 400 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 CST5P28325 142 aaPredicted RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 CCND2P30279 289 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SLC7A1P30825 629 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SFNP31947 248 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 CTCFP49711 727 aaPredicted RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 JAK3P52333 1124 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SLC12A3P55017 1021 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 SNAP25P60880 206 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 NKX6-1P78426 367 aaPredicted RBP5.36□□□□□ -1.55
SRP54-211ENST00000556445 PPARDQ03181 441 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 AP1B1Q10567 949 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 LRMPQ12912 555 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 STK4Q13043 487 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 ALCAMQ13740 583 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 KRTAP15-1Q3LI76 137 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 CTXN3Q4LDR2 81 aa5.36□□□□□ -1.55
SRP54-211ENST00000556445 HERC4Q5GLZ8 1057 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms