RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 STMN2Q93045 179 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 MCUR1Q96AQ8 359 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 FOXRED1Q96CU9 486 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 CHFRQ96EP1 664 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 PRMT6Q96LA8 375 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 C9orf72Q96LT7 481 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SLITRK1Q96PX8 696 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 PLEKHG4BQ96PX9 1271 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 DEPDC7Q96QD5 511 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 PDCD2LQ9BRP1 358 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 MSTO1Q9BUK6 570 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 KIFC3Q9BVG8 833 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 HEMGNQ9BXL5 484 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 TRIM8Q9BZR9 551 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 TRIM6Q9C030 488 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF518BQ9C0D4 1074 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 MIS12Q9H081 205 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 KIAA1683Q9H0B3 1180 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.681e-11■■■■□ 25.2
ATXN3-241ENST00000556374 LRMDAQ9H2I8 198 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 TRABDQ9H4I3 376 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 RPAP3Q9H6T3 665 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SYNCQ9H7C4 482 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SLC38A10Q9HBR0 1119 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 RAVER2Q9HCJ3 691 aaKnown RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 MLXIPLQ9NP71 852 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 ACSS2Q9NR19 701 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 TOPORSQ9NS56 1045 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 RNF146Q9NTX7 359 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 FBXO28Q9NVF7 368 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 DONSONQ9NYP3 566 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 CTNNAL1Q9UBT7 734 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SLC9A2Q9UBY0 812 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 CHORDC1Q9UHD1 332 aaPredicted RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 SFMBT1Q9UHJ3 866 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 PFDN2Q9UHV9 154 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 CPA4Q9UI42 421 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.55□□□□□ -1.68
ATXN3-241ENST00000556374 LOC285556D6RIA3 1793 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 CACNA1BQ00975 2339 aa4.55□□□□□ -1.68
ATXN3-241ENST00000556374 RLFQ13129 1914 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 GBF1Q92538 1859 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 UMODL1Q5DID0 1318 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 TCRBV16S1A1N1A0A5B0 115 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 LRRD1A4D1F6 860 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 I3L4J1 428 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 K7ERI5 159 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SCDO00767 359 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 LIN7AO14910 233 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 MCF2LO15068 1137 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 CIB2O75838 187 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 RNF8O76064 485 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 HAUS5O94927 633 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 UNC5CO95185 931 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ANP32DO95626 131 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 IFNB1P01574 187 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 CYP17A1P05093 508 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ADH4P08319 380 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SUPT20HL2P0C7V6 817 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 CETPP11597 493 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 P4HA1P13674 534 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PSMA2P25787 234 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 GCKP35557 465 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PCK1P35558 622 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SLC18A1P54219 525 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 OAZ1P54368 228 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 VCPP55072 806 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 RPS6P62753 249 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 KCNJ2P63252 427 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SMAD3P84022 425 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PDIA2Q13087 525 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 DNAJC3Q13217 504 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF268Q14587 947 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 LLGL1Q15334 1064 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF699Q32M78 642 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 TNFAIP8L3Q5GJ75 292 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 LGSNQ5TDP6 509 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 SNRNP48Q6IEG0 339 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF449Q6P9G9 518 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 DRICH1Q6PGQ1 229 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 RTN4RL1Q86UN2 441 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 TRABD2AQ86V40 505 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 RFX6Q8HWS3 928 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 WDR49Q8IV35 697 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 EXOC8Q8IYI6 725 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZBED8Q8IZ13 594 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 BCL6BQ8N143 479 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 D2HGDHQ8N465 521 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ALLCQ8N6M5 410 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PPFIBP2Q8ND30 876 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 NSUN6Q8TEA1 469 aaKnown RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 AGAP11Q8TF27 550 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ZNF483Q8TF39 744 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-241ENST00000556374 PYROXD1Q8WU10 500 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 NSMCE1Q8WV22 266 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 MIEF2Q96C03 454 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 HAUS1Q96CS2 278 aa4.54□□□□□ -1.68
ATXN3-241ENST00000556374 ERP27Q96DN0 273 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms