RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 CDY1Q9Y6F8 540 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 NUMBLQ9Y6R0 609 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 R4GN57 208 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 CNOT1A5YKK6 2376 aaKnown RBP4.19□□□□□ -1.74
ATXN3-240ENST00000556339 MIA3Q5JRA6 1907 aa4.19□□□□□ -1.74
ATXN3-240ENST00000556339 ARID2Q68CP9 1835 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 VPS13AQ96RL7 3174 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 KMT2EQ8IZD2 1858 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 NOTCH4Q99466 2003 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 KANSL1LA0AUZ9 987 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PRSS38A1L453 326 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 VWA3AA6NCI4 1184 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 USP27XA6NNY8 438 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PROB1E7EW31 1015 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ANHXE9PGG2 379 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 H0YCG3 227 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 LAD1O00515 517 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PTGESO14684 152 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 CLDN3O15551 220 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 XPOTO43592 962 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 KIF5CO60282 957 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ERLIN1O75477 346 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RHOP08100 348 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 CLTAP09496 248 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PLA2G4BP0C869 781 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 MCF2P10911 925 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 CD72P21854 359 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 HOXA9P31269 272 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 UBA7P41226 1012 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ALDH1A3P47895 512 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 LIG4P49917 911 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 SCNN1BP51168 640 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 IL2P60568 153 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 MEF2AQ02078 507 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 HTR4Q13639 388 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ELF2Q15723 593 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 KYAT1Q16773 422 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 UPP1Q16831 310 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 WHAMMP3Q1A5X7 153 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ARL6IP4Q66PJ3 421 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TPGS2Q68CL5 300 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RINT1Q6NUQ1 792 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 FBXO38Q6PIJ6 1188 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF852Q6ZMS4 543 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TPRG1Q6ZUI0 275 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF771Q7L3S4 317 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RTL10Q7L3V2 364 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RSRC2Q7L4I2 434 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 METTL23Q86XA0 190 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TMEM139Q8IV31 216 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RNF168Q8IYW5 571 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TXLNBQ8N3L3 684 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF610Q8N9Z0 462 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 IQUBQ8NA54 791 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF461Q8TAF7 563 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 CSGALNACT1Q8TDX6 532 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 NOC3LQ8WTT2 800 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RUBCNQ92622 972 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 GOLGA1Q92805 767 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 FGF14Q92915 247 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 C18orf25Q96B23 403 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ZBTB45Q96K62 511 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 SNX27Q96L92 541 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PPP1R10Q96QC0 940 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TRMT61BQ9BVS5 477 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TIPINQ9BVW5 301 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RHOBTB2Q9BYZ6 727 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 UBXN6Q9BZV1 441 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 CXCL16Q9H2A7 254 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 PRDM13Q9H4Q3 707 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 RPF1Q9H9Y2 349 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 C17orf75Q9HAS0 396 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 MAGEF1Q9HAY2 307 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 ARFGAP3Q9NP61 516 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 FANCLQ9NW38 375 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 TRMT1Q9NXH9 659 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 GDE1Q9NZC3 331 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 LARSQ9P2J5 1176 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 DNMT3BQ9UBC3 853 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 MTRRQ9UBK8 725 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 EVLQ9UI08 416 aaPredicted RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 FBXL5Q9UKA1 691 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 FBXW11Q9UKB1 542 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 MAN1B1Q9UKM7 699 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 NDRG2Q9UN36 371 aaKnown RBP4.18□□□□□ -1.74
ATXN3-240ENST00000556339 NFE2L3Q9Y4A8 694 aa4.18□□□□□ -1.74
ATXN3-240ENST00000556339 VWA8A3KMH1 1905 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ZMYM2Q9UBW7 1377 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 MYH15Q9Y2K3 1946 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ARHGEF37A1IGU5 675 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 A6NNZ2 444 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 PP2D1A8MPX8 630 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 LACTBL1A8MY62 500 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TMEM189-UBE2V1I3L0A0 370 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF263O14978 683 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 SYN3O14994 580 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 POLR2DO15514 142 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 KDM1AO60341 852 aa4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TBCAO75347 108 aaKnown RBP4.17□□□□□ -1.74
ATXN3-240ENST00000556339 TOM1L1O75674 476 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms