RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC5A2P31639 672 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 HOXD13P35453 343 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 DRD3P35462 400 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CASRP41180 1078 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CSKP41240 450 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 PSMD8P48556 350 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF177Q13360 481 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 MORC3Q14149 939 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 NCAPHQ15003 741 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 TGIF1Q15583 401 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CDKN3Q16667 212 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 SKIDA1Q1XH10 827 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 POM121L1PQ3SYA9 428 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF648Q5T619 568 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 RSRC2Q7L4I2 434 aaKnown RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 TRIM69Q86WT6 500 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 STK40Q8N2I9 435 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ARHGAP18Q8N392 663 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF557Q8N988 423 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 TMEM145Q8NBT3 493 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 FIBINQ8TAL6 211 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 WFDC5Q8TCV5 224 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ELMO3Q96BJ8 720 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 EPSTI1Q96J88 318 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ZSCAN31Q96LW9 406 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 DUSP16Q9BY84 665 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ADNPQ9H2P0 1102 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 CAAP1Q9H8G2 361 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 PANK4Q9NVE7 773 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 NCKIPSDQ9NZQ3 722 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 HMGXB4Q9UGU5 601 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 INTS6Q9UL03 887 aaKnown RBP7.07□□□□□ -1.28
ATXN3-236ENST00000556220 RP1P56715 2156 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 PLXNA2O75051 1894 aa7.07□□□□□ -1.28
ATXN3-236ENST00000556220 ITPR3Q14573 2671 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 PLRG1O43660 514 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 TBL1XO60907 577 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 RTN2O75298 545 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 NEBLO76041 1014 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 CLSTN1O94985 981 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 KIF20AO95235 890 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 BMP15O95972 392 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 IL1BP01584 269 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 C4BPAP04003 597 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 SRPRAP08240 638 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 TRIM21P19474 475 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 SGSHP51688 502 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 CLCN7P51798 805 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 AP3M2P53677 418 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 YWHAGP61981 247 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 BIRC3Q13489 604 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 SETMARQ53H47 684 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 MANEAQ5SRI9 462 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 PIK3R6Q5UE93 754 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 RRAGBQ5VZM2 374 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 GUSBP11Q6P575 273 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 STXBP4Q6ZWJ1 553 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 EFL1Q7Z2Z2 1120 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 FBXO39Q8N4B4 442 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 XXYLT1Q8NBI6 393 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF507Q8TCN5 953 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 PTPRN2Q92932 1015 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 IPO9Q96P70 1041 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 TWNKQ96RR1 684 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 UBXN6Q9BZV1 441 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 AGPAT3Q9NRZ7 376 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 PLEKHB1Q9UF11 243 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 SLCO3A1Q9UIG8 710 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 ANAPC2Q9UJX6 822 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 ERVW-1Q9UQF0 538 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 MAPK8IP1Q9UQF2 711 aa7.06□□□□□ -1.28
ATXN3-236ENST00000556220 HBS1LQ9Y450 684 aaKnown RBP7.06□□□□□ -1.28
ATXN3-236ENST00000556220 ITIH6Q6UXX5 1313 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 GOLGA6L7A0A1B0GV03 622 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 PLD2O14939 933 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CLIC2O15247 247 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 NVLO15381 856 aaKnown RBP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 SLC31A1O15431 190 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 TGFB1I1O43294 461 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 LRIG2O94898 1065 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 VNN1O95497 513 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 LIPCP11150 499 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 UGT1A5P35504 534 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CASP4P49662 377 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CYP2J2P51589 502 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 PDX1P52945 283 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 METAP1P53582 386 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 RIPPLY3P57055 190 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 HNRNPKP61978 463 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 SNRPFP62306 86 aaKnown RBP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 CYP4F2P78329 520 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 EIF3IQ13347 325 aaKnown RBP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 IKZF1Q13422 519 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 ELAVL3Q14576 367 aaKnown RBP7.05□□□□□ -1.28
ATXN3-236ENST00000556220 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 SGSM1Q2NKQ1 1148 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 ZNF542PQ5EBM4 170 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 RAB41Q5JT25 222 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 FAM46CQ5VWP2 391 aa7.05□□□□□ -1.28
ATXN3-236ENST00000556220 ZCCHC8Q6NZY4 707 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms