RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 INSIG1O15503 277 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PHF2O75151 1096 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SOCS5O75159 536 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ZNF821O75541 412 aaPredicted RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 GCATO75600 419 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ANXA9O76027 345 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GAS8O95995 478 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 IFNB1P01574 187 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 HLA-DQB2P05538 268 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 VAV1P15498 845 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GABRG2P18507 467 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 NDUFV2P19404 249 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 COL9A1P20849 921 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PTPN3P26045 913 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 OXTRP30559 389 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PSMD8P48556 350 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 FNTAP49354 379 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SUOXP51687 545 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 MAXP61244 160 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 RPS14P62263 151 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 POLR2LP62875 67 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 CSTF1Q05048 431 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 WASHC5Q12768 1159 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SIX1Q15475 284 aaPredicted RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 CST6Q15828 149 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SLC14A2Q15849 920 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 CYP1B1Q16678 543 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 WHAMMP3Q1A5X7 153 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 P3H1Q32P28 736 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ZNF528Q3MIS6 628 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 USP39Q53GS9 565 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 ZNF805Q5CZA5 627 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ARSIQ5FYB1 569 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 DNTTIP2Q5QJE6 756 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 ALG1LQ6GMV1 187 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 CCDC70Q6NSX1 233 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GDPD4Q6W3E5 623 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ARHGEF18Q6ZSZ5 1173 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 USP30Q70CQ3 517 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 C11orf74Q86VG3 221 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 RASSF3Q86WH2 238 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 CREG2Q8IUH2 290 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PRELID2Q8N945 189 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 FAM71DQ8N9W8 422 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 CHST14Q8NCH0 376 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 MNS1Q8NEH6 495 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ATL2Q8NHH9 583 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PIP4K2CQ8TBX8 421 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GRIN3AQ8TCU5 1115 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 HCAR2Q8TDS4 363 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GRK7Q8WTQ7 553 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 EXOC2Q96KP1 924 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 FAM129BQ96TA1 746 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 OMDQ99983 421 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 FAM118BQ9BPY3 351 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 TMEM121Q9BTD3 319 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 LRFN3Q9BTN0 628 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 AP1M1Q9BXS5 423 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 MKRN2Q9H000 416 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 SLC25A51Q9H1U9 297 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 PABPC3Q9H361 631 aaKnown RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 SUV39H2Q9H5I1 410 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 USP29Q9HBJ7 922 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 GLOD4Q9HC38 313 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 C11orf16Q9NQ32 467 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 VPS45Q9NRW7 570 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 FBXL12Q9NXK8 326 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 RSPH14Q9UHP6 348 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 EVLQ9UI08 416 aaPredicted RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 CDC23Q9UJX2 597 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 ATP8A1Q9Y2Q0 1164 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 MUC22E2RYF6 1773 aaPredicted RBP7.73□□□□□ -1.17
TDP1-214ENST00000556063 EYSQ5T1H1 3165 aa7.73□□□□□ -1.17
TDP1-214ENST00000556063 SPAG17Q6Q759 2223 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ANKRD36A6QL64 1941 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 K7ESF4 209 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 PSMD3O43242 534 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 SLC7A4O43246 635 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ZNF500O60304 480 aaPredicted RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 LEFTY1O75610 366 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 RNASEH2AO75792 299 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 UGT2B4P06133 528 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 C7P10643 843 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CR2P20023 1033 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ITGB7P26010 798 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 CNR2P34972 360 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 NEK3P51956 506 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 COPAP53621 1224 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 GEMP55040 296 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 RPL26P61254 145 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 DSC2Q02487 901 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ZBTB17Q13105 803 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 OASLQ15646 514 aaKnown RBP7.72□□□□□ -1.17
TDP1-214ENST00000556063 PARP6Q2NL67 630 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ANKRD20A2Q5SQ80 823 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ARMC12Q5T9G4 340 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ANKRD20A1Q5TYW2 823 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 ANKRD20A3Q5VUR7 823 aa7.72□□□□□ -1.17
TDP1-214ENST00000556063 FBXL19Q6PCT2 694 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms