RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CATSPERBQ9H7T0 1116 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 DMAP1Q9NPF5 467 aaPredicted RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 MRPL40Q9NQ50 206 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 ANLNQ9NQW6 1124 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 EPS15L1Q9UBC2 864 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 XPR1Q9UBH6 696 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 VPS28Q9UK41 221 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 G3BP2Q9UN86 482 aaKnown RBP7.09□□□□□ -1.28
TDP1-213ENST00000555880 PSMD13Q9UNM6 376 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 INPP5FQ9Y2H2 1132 aa7.09□□□□□ -1.28
TDP1-213ENST00000555880 FNDC1Q4ZHG4 1894 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 H3BNX3 289 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 I6L893 689 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 CLGNO14967 610 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 CFLARO15519 480 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 NPHS1O60500 1241 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ADH1BP00325 375 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ENO3P13929 434 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 RPL9P32969 192 aaKnown RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 CD151P48509 253 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 HSPA13P48723 471 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 CHN2P52757 468 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 RABGGTBP53611 331 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 HUNKP57058 714 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ADAM17P78536 824 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 SATB1Q01826 763 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 SEPT6Q14141 434 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 RFTN1Q14699 578 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 PDK3Q15120 406 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 MAPRE2Q15555 327 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 PDCD2Q16342 344 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 FAM83EQ2M2I3 478 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 LIN52Q52LA3 116 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 OGFRL1Q5TC84 451 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 FOXB2Q5VYV0 432 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 PM20D1Q6GTS8 502 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 TIGD7Q6NT04 549 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 TAF2Q6P1X5 1199 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 KLC3Q6P597 504 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 TAC4Q86UU9 113 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 CCDC117Q8IWD4 279 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 CENPLQ8N0S6 344 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 PGAM4Q8N0Y7 254 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 FSTL5Q8N475 847 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 CNTD1Q8N815 330 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 PHC3Q8NDX5 983 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ACVR1CQ8NER5 493 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 NPLOC4Q8TAT6 608 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 RCN3Q96D15 328 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ELMO2Q96JJ3 720 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 CATSPER2Q96P56 530 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 FCRL5Q96RD9 977 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 FICDQ9BVA6 458 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 MRPL1Q9BYD6 325 aaKnown RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 SIK2Q9H0K1 926 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 WDR41Q9HAD4 459 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 EML4Q9HC35 981 aaKnown RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 MRM3Q9HC36 420 aaKnown RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 GLOD4Q9HC38 313 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ZBTB26Q9HCK0 441 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 VCX3AQ9NNX9 186 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 ENTPD7Q9NQZ7 604 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 GTSE1Q9NYZ3 720 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 NDUFA13Q9P0J0 144 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 GNEQ9Y223 722 aaKnown RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 TCAF1Q9Y4C2 921 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 TIMM13Q9Y5L4 95 aaPredicted RBP7.08□□□□□ -1.28
TDP1-213ENST00000555880 SNX10Q9Y5X0 201 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 MIA3Q5JRA6 1907 aa7.08□□□□□ -1.28
TDP1-213ENST00000555880 HAS3O00219 553 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MATN3O15232 486 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 GRID2O43424 1007 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DLX3O60479 287 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 AHSGP02765 367 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ME2P23368 584 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 GSTT1P30711 240 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CSRP3P50461 194 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZNF157P51786 506 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 CLCNKBP51801 687 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 THOP1P52888 689 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MRPS22P82650 360 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 MRPS6P82932 125 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 MPP1Q00013 466 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 POU4F1Q01851 419 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 FOLH1Q04609 750 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 DLG1Q12959 904 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 CTBP1Q13363 440 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MSLNQ13421 630 aaPredicted RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 GRM2Q14416 872 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 MAPRE1Q15691 268 aaKnown RBP7.07□□□□□ -1.28
TDP1-213ENST00000555880 PIGGQ5H8A4 983 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 BRMS1LQ5PSV4 323 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PPM1LQ5SGD2 360 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 SH2D4BQ5SQS7 431 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 PRAMEF19Q5SWL8 479 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ARMC3Q5W041 872 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 ZNF470Q6ECI4 717 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 TRAF7Q6Q0C0 670 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 RNF111Q6ZNA4 994 aa7.07□□□□□ -1.28
TDP1-213ENST00000555880 KIAA0408Q6ZU52 694 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms