RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 PRAMEF11O60813 436 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ZNF189O75820 626 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ZMPSTE24O75844 475 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 SLU7O95391 586 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 APBB3O95704 486 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 PABPC1P11940 636 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ENGP17813 658 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 BCKDHBP21953 392 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 GLDCP23378 1020 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 CCNCP24863 283 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 RBL1P28749 1068 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 OPRD1P41143 372 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 EIF2DP41214 584 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ATP5OP48047 213 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 DGKGP49619 791 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 CLCN6P51797 869 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 IFI35P80217 286 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ARF5P84085 180 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 IL10RBQ08334 325 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 MESP2Q0VG99 397 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 TRIM61Q5EBN2 209 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 PITRM1Q5JRX3 1037 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 NAIF1Q69YI7 327 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ADIPOR2Q86V24 386 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 CCDC117Q8IWD4 279 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 CCDC13Q8IYE1 715 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 APCDD1Q8J025 514 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ALLCQ8N6M5 410 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 NAT16Q8N8M0 369 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 HTR3CQ8WXA8 447 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 MAML1Q92585 1016 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 RUNDC3BQ96NL0 473 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 TMEM121Q9BTD3 319 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 MUC3BQ9H195 1237 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ATP13A1Q9HD20 1204 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 VPS51Q9UID3 782 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 VPS28Q9UK41 221 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 ZNF148Q9UQR1 794 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 INVSQ9Y283 1065 aa11.93□□□□□ -0.5
MTHFD1-211ENST00000555709 MYO18AQ92614 2054 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 CXorf51AA0A1B0GTR3 108 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 J3KR12 359 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 KCNK1O00180 336 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 RNF103O00237 685 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 SNAP91O60641 907 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 RNF40O75150 1001 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 SLC6A11P48066 632 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 DR1Q01658 176 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 AP1B1Q10567 949 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 WASHC5Q12768 1159 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 ZBTB17Q13105 803 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 NR1H3Q13133 447 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 DHX34Q14147 1143 aaKnown RBP11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 DMC1Q14565 340 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 GEN1Q17RS7 908 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 TMEM215Q68D42 235 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 TIGD7Q6NT04 549 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 SYT13Q7L8C5 426 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 C11orf74Q86VG3 221 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 AHI1Q8N157 1196 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 FAM71DQ8N9W8 422 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 GLIS1Q8NBF1 620 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 CCNYQ8ND76 341 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 ATL2Q8NHH9 583 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 WFIKKN2Q8TEU8 576 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 GRK7Q8WTQ7 553 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 PIGKQ92643 395 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 ZNF599Q96NL3 588 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 SPON2Q9BUD6 331 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 C2orf49Q9BVC5 232 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 SP110Q9HB58 689 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 MBD1Q9UIS9 605 aaPredicted RBP11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 PTPRBP23467 1997 aa11.92□□□□□ -0.5
MTHFD1-211ENST00000555709 PIEZO2Q9H5I5 2752 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 ZSCAN5CA6NGD5 496 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 J3QKU1 62 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 CBX4O00257 560 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 MATN3O15232 486 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 KCNN4O15554 427 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 TTI1O43156 1089 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 MTSS1O43312 755 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 RAD51CO43502 376 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 ECEL1O95672 775 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 CD160O95971 181 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 GAS8O95995 478 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 EGFP01133 1207 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 PTPN3P26045 913 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 STIP1P31948 543 aaKnown RBP11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 NUMBP49757 651 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 KDSRQ06136 332 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 GRSF1Q12849 480 aaKnown RBP eCLIP11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 PTK6Q13882 451 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 KCTD19Q17RG1 926 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 TMCO4Q5TGY1 634 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 GRAMD4Q6IC98 578 aa11.91□□□□□ -0.5
MTHFD1-211ENST00000555709 C8orf74Q6P047 294 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms