RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 DNAJC3Q13217 504 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SMAD1Q15797 465 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 KLHL40Q2TBA0 621 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 FIGNQ5HY92 759 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 ERMARDQ5T6L9 678 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 DHRS13Q6UX07 377 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 GDPD4Q6W3E5 623 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 PTAR1Q7Z6K3 402 aaPredicted RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 DCP2Q8IU60 420 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 NETO2Q8NC67 525 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 FNIP1Q8TF40 1166 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 VOPP1Q96AW1 172 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 ZNF653Q96CK0 615 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 BMFQ96LC9 184 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 KLHL32Q96NJ5 620 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 EIF3CQ99613 913 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SNRNP25Q9BV90 132 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 TRIM7Q9C029 511 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 DHX35Q9H5Z1 703 aaKnown RBP14.01□□□□□ -0.17
PCNX4-209ENST00000555569 PCSK1NQ9UHG2 260 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 SCINQ9Y6U3 715 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 CHD6Q8TD26 2715 aa14.01□□□□□ -0.17
PCNX4-209ENST00000555569 ANKRD36A6QL64 1941 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 MYLKQ15746 1914 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 FAM208BQ5VWN6 2430 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 IGLON5A6NGN9 336 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 EEF2KO00418 725 aaKnown RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 RAD51BO15315 384 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 PRPSAP2O60256 369 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 RFPL3O75679 317 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 CAPNS1P04632 268 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 C1SP09871 688 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 MYBL1P10243 752 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 MIPP30301 263 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 ACADVLP49748 655 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 SGCGQ13326 291 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 CYTH1Q15438 398 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 CA9Q16790 459 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 KYAT3Q6YP21 454 aaKnown RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 Q6ZSR6 202 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 LUZP1Q86V48 1076 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 MARCH9Q86YJ5 346 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 SLC22A18ASQ8N1D0 253 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 ARFGAP1Q8N6T3 406 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 ASB12Q8WXK4 309 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 TSC1Q92574 1164 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 ARHGEF26Q96DR7 871 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 TRIM11Q96F44 468 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 IFT43Q96FT9 208 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 PEBP4Q96S96 227 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 KCTD15Q96SI1 283 aaPredicted RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 C1QTNF2Q9BXJ5 285 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 LRRC19Q9H756 370 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 LHX3Q9UBR4 397 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 UBA2Q9UBT2 640 aaPredicted RBP14□□□□□ -0.17
PCNX4-209ENST00000555569 GGT7Q9UJ14 662 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 ITM2BQ9Y287 266 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 MFHAS1Q9Y4C4 1052 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 LRRK1Q38SD2 2015 aa14□□□□□ -0.17
PCNX4-209ENST00000555569 POM121BA6NF01 834 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 ARHGAP42A6NI28 874 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 AREL1O15033 823 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 INSIG1O15503 277 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 SPINT1O43278 529 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 DAPK3O43293 454 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 CDK4P11802 303 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 DGKAP23743 735 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 NDST2P52849 883 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 TDRD12Q587J7 1177 aaKnown RBP13.99□□□□□ -0.17
PCNX4-209ENST00000555569 TTC7BQ86TV6 843 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 PROSER1Q86XN7 944 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 DENND6BQ8NEG7 585 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 CELF6Q96J87 481 aaKnown RBP13.99□□□□□ -0.17
PCNX4-209ENST00000555569 NCAPGQ9BPX3 1015 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 CPEB1Q9BZB8 566 aaKnown RBP13.99□□□□□ -0.17
PCNX4-209ENST00000555569 SLC39A8Q9C0K1 460 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 ISCUQ9H1K1 167 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 MRPL47Q9HD33 250 aaKnown RBP13.99□□□□□ -0.17
PCNX4-209ENST00000555569 GPR27Q9NS67 375 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 MYO1AQ9UBC5 1043 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 DKK3Q9UBP4 350 aa13.99□□□□□ -0.17
PCNX4-209ENST00000555569 CFAP47Q6ZTR5 3102 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 DMXL2Q8TDJ6 3036 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 A0A1W2PQJ5 194 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 FAM149AA5PLN7 773 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 J3KR12 359 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 TAF4O00268 1085 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 TRIM38O00635 465 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 FPGTO14772 594 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 ZZEF1O43149 2961 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PRAMEF11O60813 436 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 LRCH4O75427 683 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PIAS2O75928 621 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 TIMP2P16035 220 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 CKMT2P17540 419 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 ERCC2P18074 760 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PBX1P40424 430 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 RABIFP47224 123 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms