RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GATAD2AQ86YP4 633 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ZNF248Q8NDW4 579 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 SLC2A12Q8TD20 617 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ARRDC3Q96B67 414 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ACAD9Q9H845 621 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 CLK4Q9HAZ1 481 aaKnown RBP3.12□□□□□ -1.91
SRP54-207ENST00000555535 KLQ9UEF7 1012 aa3.12□□□□□ -1.91
SRP54-207ENST00000555535 ANO9A1A5B4 782 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 J3KR12 359 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 TIMM23O14925 209 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 MMP3P08254 477 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 FGF5P12034 268 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 CKMT1AP12532 417 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 PNLIPRP1P54315 467 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 ADORA2A-AS1P86434 159 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 ECT2LQ008S8 904 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 CYP4A11Q02928 519 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 DHX34Q14147 1143 aaKnown RBP3.11□□□□□ -1.91
SRP54-207ENST00000555535 DCTN1Q14203 1278 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 SPARCL1Q14515 664 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 TBRG1Q3YBR2 411 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 TMEM268Q5VZI3 342 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 TYW3Q6IPR3 259 aaKnown RBP3.11□□□□□ -1.91
SRP54-207ENST00000555535 CCAR1Q8IX12 1150 aaKnown RBP3.11□□□□□ -1.91
SRP54-207ENST00000555535 SCAIQ8N9R8 606 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 SCAMP5Q8TAC9 235 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 MTBPQ96DY7 904 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 ZNF599Q96NL3 588 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 IFT27Q9BW83 186 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 CADM1Q9BY67 442 aaKnown RBP3.11□□□□□ -1.91
SRP54-207ENST00000555535 UPB1Q9UBR1 384 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 PHTF1Q9UMS5 762 aa3.11□□□□□ -1.91
SRP54-207ENST00000555535 LOC105371045A0A1W2PR82 267 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 TMEM247A6NEH6 219 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 NFRKBQ6P4R8 1299 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 RASGRP2Q7LDG7 609 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 GALNT7Q86SF2 657 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 PATL1Q86TB9 770 aaKnown RBP3.1□□□□□ -1.91
SRP54-207ENST00000555535 SYTL1Q8IYJ3 562 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 FAM71BQ8TC56 605 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 SGCZQ96LD1 299 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 OR1F2PQ96R84 312 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 F2RL3Q96RI0 385 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 RTKNQ9BST9 563 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 CLPBQ9H078 707 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 MVB12BQ9H7P6 319 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 OBP2BQ9NPH6 170 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 OGFRQ9NZT2 677 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 RNF215Q9Y6U7 377 aa3.1□□□□□ -1.91
SRP54-207ENST00000555535 EFCAB8A8MWE9 144 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 HNRNPCL2B2RXH8 293 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 RTL8CO15255 209 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 CHN1P15882 459 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 SSTR2P30874 369 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 DCTDP32321 178 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 AK2P54819 239 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 NLRP5P59047 1200 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 PTK2BQ14289 1009 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 TCTE1Q5JU00 501 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 TTC22Q5TAA0 569 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 AADACL2Q6P093 401 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 C11orf96Q7Z7L8 435 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 P2RY8Q86VZ1 359 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 BRSK2Q8IWQ3 736 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 CNBD1Q8NA66 436 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 ADAD2Q8NCV1 583 aaKnown RBP3.09□□□□□ -1.91
SRP54-207ENST00000555535 RFWD2Q8NHY2 731 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 ATOH1Q92858 354 aaPredicted RBP3.09□□□□□ -1.91
SRP54-207ENST00000555535 LGALS12Q96DT0 336 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 TEFMQ96QE5 360 aaKnown RBP3.09□□□□□ -1.91
SRP54-207ENST00000555535 PIGSQ96S52 555 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 LITAFQ99732 161 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 BRD8Q9H0E9 1235 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 CXorf56Q9H5V9 222 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 NLKQ9UBE8 527 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 CDC23Q9UJX2 597 aa3.09□□□□□ -1.91
SRP54-207ENST00000555535 LGALS16A8MUM7 142 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 SYN3O14994 580 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE7O76087 117 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 PMS2P2O95744 297 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 PRSS1P07477 247 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE12FP0CL80 117 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE12GP0CL81 117 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE12IP0CL82 117 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 ACP5P13686 325 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 PRG2P13727 222 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 ARSAP15289 507 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 MCM3P25205 808 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 FMO4P31512 558 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 KRT9P35527 623 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 BRWD1-AS2P59051 145 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE1Q13065 139 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GAGE4Q13068 117 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 ATPAF1Q5TC12 328 aaPredicted RBP3.08□□□□□ -1.92
SRP54-207ENST00000555535 FAM69BQ5VUD6 431 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 IL31Q6EBC2 164 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 GGT6Q6P531 493 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 KSR2Q6VAB6 950 aa3.08□□□□□ -1.92
SRP54-207ENST00000555535 SLC44A2Q8IWA5 706 aaPredicted RBP3.08□□□□□ -1.92
SRP54-207ENST00000555535 OR4N2Q8NGD1 307 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms