RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 OR12D3Q9UGF7 316 aa17.25■□□□□ 0.35
PPP4R3A-208ENST00000555462 BTRCQ9Y297 605 aa17.25■□□□□ 0.35
PPP4R3A-208ENST00000555462 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 CASQ2O14958 399 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 MSI1O43347 362 aaKnown RBP17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 ATP6V1G1O75348 118 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 AP2A1O95782 977 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 CBR4Q8N4T8 237 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 TMEM102Q8N9M5 508 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 GAB3Q8WWW8 586 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 B3GALT6Q96L58 329 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 DRC3Q9H069 523 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 ALG9Q9H6U8 611 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 MPP6Q9NZW5 540 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 TGFB3P10600 412 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 ZNF26P17031 533 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 HOXA11P31270 313 aaPredicted RBP17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 ADRA1BP35368 520 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 SLC1A2P43004 574 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 IKBKEQ14164 716 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 TTLL4Q14679 1199 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 FAM83EQ2M2I3 478 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 RIOX2Q8IUF8 465 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 TMEM151AQ8N4L1 468 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 SEPHS2Q99611 448 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 ZNF408Q9H9D4 720 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 PLEKHA5Q9HAU0 1116 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 TBC1D30Q9Y2I9 924 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 CEPT1Q9Y6K0 416 aa17.24■□□□□ 0.35
PPP4R3A-208ENST00000555462 NCF1BA6NI72 391 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 NCF1CA8MVU1 366 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 FBP2O00757 339 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 SDHDO14521 159 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 HUS1O60921 280 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 CCDC166P0CW27 439 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 NCF1P14598 390 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PTPN9P43378 593 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PRKAA1Q13131 559 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 GPR107Q5VW38 600 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PGAM4Q8N0Y7 254 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 KDM1BQ8NB78 822 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 B3GALNT2Q8NCR0 500 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 BEST2Q8NFU1 509 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 HMGCLL1Q8TB92 370 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 TMEM40Q8WWA1 233 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PCDHGA7Q9Y5G6 932 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 MYBPHLA2RUH7 354 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 J3QRK9 145 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 LRIG2O94898 1065 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 STMN1P16949 149 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 OTUD3Q5T2D3 398 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 ARMCX2Q7L311 632 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 DDIASQ8IXT1 998 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 FBXL8Q96CD0 374 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 RBPJLQ9UBG7 517 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 NUP214P35658 2090 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PSMD12O00232 456 aaPredicted RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 ACOT8O14734 319 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 MRASO14807 208 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 UBDO15205 165 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 DENRO43583 198 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 GJB3O75712 270 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 LRPAP1P30533 357 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 KCNC1P48547 511 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 SLC5A3P53794 718 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 KIAA0319Q5VV43 1072 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 ZYG11AQ6WRX3 759 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 TMEM135Q86UB9 458 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 DNAJB14Q8TBM8 379 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 CNDP1Q96KN2 507 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 C3orf30Q96M34 536 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 MRPS26Q9BYN8 205 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 PAIP1Q9H074 479 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 LTB4R2Q9NPC1 389 aa17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 POLR2AP24928 1970 aaKnown RBP17.23■□□□□ 0.35
PPP4R3A-208ENST00000555462 GOLGA4Q13439 2230 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 SMIM28A0A1B0GU29 152 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 EDNRBP24530 442 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 ATP1A4Q13733 1029 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 TFAP2DQ7Z6R9 452 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 DNAJB3Q8WWF6 145 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 SLCO4A1Q96BD0 722 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 KCTD3Q9Y597 815 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 BCAS2O75934 225 aaPredicted RBP17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 PCNAP12004 261 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 MYL4P12829 197 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 MLNP12872 115 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 INSCQ1MX18 579 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 HMBOX1Q6NT76 420 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 ARRDC4Q8NCT1 418 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 ANKRD49Q8WVL7 239 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 LPPQ93052 612 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 RBM38Q9H0Z9 239 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 RRN3Q9NYV6 651 aa17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 RSL24D1Q9UHA3 163 aaKnown RBP17.22■□□□□ 0.35
PPP4R3A-208ENST00000555462 FYNP06241 537 aa17.21■□□□□ 0.35
PPP4R3A-208ENST00000555462 ALOX15P16050 662 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms