RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FRG2BQ96QU4 278 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 FTOQ9C0B1 505 aaKnown RBP eCLIP5.68□□□□□ -1.5
VRK1-205ENST00000555402 VPS33BQ9H267 617 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 GHITMQ9H3K2 345 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 MOV10Q9HCE1 1003 aaKnown RBP5.68□□□□□ -1.5
VRK1-205ENST00000555402 ZNF304Q9HCX3 659 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 ATP8A2Q9NTI2 1148 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 C20orf141Q9NUB4 165 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 TRNAU1APQ9NX07 287 aaKnown RBP5.68□□□□□ -1.5
VRK1-205ENST00000555402 GRHL1Q9NZI5 618 aa5.68□□□□□ -1.5
VRK1-205ENST00000555402 LIMA1Q9UHB6 759 aaKnown RBP5.68□□□□□ -1.5
VRK1-205ENST00000555402 TTC36A6NLP5 189 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 TGFB1I1O43294 461 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ICAM3P32942 547 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 BSGP35613 385 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CPOXP36551 454 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ARSFP54793 590 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 YWHAZP63104 245 aaKnown RBP5.67□□□□□ -1.5
VRK1-205ENST00000555402 HSF1Q00613 529 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CYP4A11Q02928 519 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 GOLGA8DPQ0D2H9 430 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 PMPCAQ10713 525 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 VEPH1Q14D04 833 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 PGM5Q15124 567 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 MED22Q15528 200 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 TAF11Q15544 211 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 RPE65Q16518 533 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 GSTA3Q16772 222 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 MIS18BP1Q6P0N0 1132 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CDC73Q6P1J9 531 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 SLC46A3Q7Z3Q1 461 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 MRPL10Q7Z7H8 261 aaKnown RBP5.67□□□□□ -1.5
VRK1-205ENST00000555402 WDR5BQ86VZ2 330 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CADM4Q8NFZ8 388 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ZNF398Q8TD17 642 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ZNF419Q96HQ0 510 aaPredicted RBP5.67□□□□□ -1.5
VRK1-205ENST00000555402 SCNM1Q9BWG6 230 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CCDC68Q9H2F9 335 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 SYNCQ9H7C4 482 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ACTR5Q9H9F9 607 aaPredicted RBP5.67□□□□□ -1.5
VRK1-205ENST00000555402 NSMCE4AQ9NXX6 385 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 KIAA1456Q9P272 454 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 HSPB7Q9UBY9 170 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 FBXO40Q9UH90 709 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CDH22Q9UJ99 828 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 ZNF112Q9UJU3 913 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 CORO1CQ9ULV4 474 aaPredicted RBP5.67□□□□□ -1.5
VRK1-205ENST00000555402 CLDN16Q9Y5I7 305 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 KCNE2Q9Y6J6 123 aa5.67□□□□□ -1.5
VRK1-205ENST00000555402 RUSC2Q8N2Y8 1516 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 A0A0A0MQY5 61 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 EIF3CLB5ME19 914 aaKnown RBP5.66□□□□□ -1.5
VRK1-205ENST00000555402 SNAP23O00161 211 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 RHODO00212 210 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 UGDHO60701 494 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 BCAR3O75815 825 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 SLC2A4P14672 509 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
VRK1-205ENST00000555402 NUCB1Q02818 461 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 TMEM115Q12893 351 aaPredicted RBP5.66□□□□□ -1.5
VRK1-205ENST00000555402 ME3Q16798 604 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 ALG10Q5BKT4 473 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 ALG10BQ5I7T1 473 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
VRK1-205ENST00000555402 ATG9BQ674R7 924 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 TTC39CQ8N584 583 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 PRKRIP1Q9H875 184 aaPredicted RBP5.66□□□□□ -1.5
VRK1-205ENST00000555402 HCFC1R1Q9NWW0 138 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 EHD2Q9NZN4 543 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 CTNNAL1Q9UBT7 734 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 TBC1D29Q9UFV1 150 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 UTS2RQ9UKP6 389 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 LYVE1Q9Y5Y7 322 aa5.66□□□□□ -1.5
VRK1-205ENST00000555402 RSF1Q96T23 1441 aaPredicted RBP5.65□□□□□ -1.5
VRK1-205ENST00000555402 KAT6BQ8WYB5 2073 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 A0A1W2PQM1 296 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 C2CD4BA6NLJ0 364 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 LRRC53A6NM62 1247 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 E5RJQ4 531 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 PTGES3LE9PB15 166 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 LDLRAD4O15165 306 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 TIMM44O43615 452 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 SLC25A17O43808 307 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 KIF1CO43896 1103 aaKnown RBP5.65□□□□□ -1.5
VRK1-205ENST00000555402 NEURL1O76050 574 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 TMCC1O94876 653 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 FGBP02675 491 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 LCKP06239 509 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 IRF1P10914 325 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 GNAQP50148 359 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 CUL4AQ13619 759 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 PPP2R5BQ15173 497 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 SLC9C1Q4G0N8 1177 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 RILPL1Q5EBL4 403 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 AAGABQ6PD74 315 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 BRINP3Q76B58 766 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 DPP10Q8N608 796 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 FRMD1Q8N878 549 aa5.65□□□□□ -1.5
VRK1-205ENST00000555402 BCAS4Q8TDM0 211 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms