RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 EXOC2Q96KP1 924 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SPATA13Q96N96 652 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 AGAP3Q96P47 875 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SEMA3CQ99985 751 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 AP1M1Q9BXS5 423 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 FAM126AQ9BYI3 521 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SUV39H2Q9H5I1 410 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 NOD2Q9HC29 1040 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SEPT10Q9P0V9 454 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 DKK3Q9UBP4 350 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 CDC23Q9UJX2 597 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF148Q9UQR1 794 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 CACNA1IQ9P0X4 2223 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 GOLGA6L10A0A0M3HER8 536 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 A0A1W2PQ67 120 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 ESPNB1AK53 854 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 C1QTNF3-AMACRE9PGA6 284 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 CCDC188H7C350 402 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 TRAFD1O14545 582 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 HTRA2O43464 458 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 BNIP3LO60238 219 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 OPHN1O60890 802 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 PHF2O75151 1096 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 ZNF217O75362 1048 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 NEBLO76041 1014 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 ADH1BP00325 375 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 IL1BP01584 269 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 MMP2P08253 660 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 SLC8A1P32418 973 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 COILP38432 576 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 KCNJ1P48048 391 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 FNTAP49354 379 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 GDF10P55107 478 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 LMNB2Q03252 620 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 SFSWAPQ12872 951 aaKnown RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 SNX1Q13596 522 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 IHHQ14623 411 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 ZNF805Q5CZA5 627 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 ANO7Q6IWH7 933 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 GDPD4Q6W3E5 623 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 USP30Q70CQ3 517 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 PRPF39Q86UA1 669 aaKnown RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 RYBPQ8N488 228 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 FAM71DQ8N9W8 422 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 OR6K2Q8NGY2 324 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 PIP4K2CQ8TBX8 421 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 CAPZA3Q96KX2 299 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 SCUBE2Q9NQ36 999 aa12.83□□□□□ -0.36
SYNE2-219ENST00000555323 USP36Q9P275 1121 aaKnown RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
SYNE2-219ENST00000555323 TSPAN11A1L157 253 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 TTC24A2A3L6 582 aaPredicted RBP12.82□□□□□ -0.36
SYNE2-219ENST00000555323 AXIN1O15169 862 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 FZD6O60353 706 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 SOCS5O75159 536 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 GJB3O75712 270 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 URI1O94763 535 aaPredicted RBP12.82□□□□□ -0.36
SYNE2-219ENST00000555323 DNTTP04053 509 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 ITGB7P26010 798 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 GKP32189 559 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 DRD3P35462 400 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 NRLP54845 237 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 SKOR1P84550 965 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 DSC2Q02487 901 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
SYNE2-219ENST00000555323 BCL2L1Q07817 233 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 ITKQ08881 620 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 PARP6Q2NL67 630 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 ITPRIPL1Q6GPH6 555 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 TTC27Q6P3X3 843 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 CCDC137Q6PK04 289 aaKnown RBP12.82□□□□□ -0.36
SYNE2-219ENST00000555323 TSSK4Q6SA08 328 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 KBTBD6Q86V97 674 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 CCDC110Q8TBZ0 833 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 HMGB4Q8WW32 186 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 SLCO2A1Q92959 643 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 PRRX2Q99811 253 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 HDAC8Q9BY41 377 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 CEP41Q9BYV8 373 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 SLC6A17Q9H1V8 727 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 GBA3Q9H227 469 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 PABPC3Q9H361 631 aaKnown RBP12.82□□□□□ -0.36
SYNE2-219ENST00000555323 ZDHHC6Q9H6R6 413 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 ATP13A3Q9H7F0 1226 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 VPS45Q9NRW7 570 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 PCYOX1Q9UHG3 505 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 NEU2Q9Y3R4 380 aa12.82□□□□□ -0.36
SYNE2-219ENST00000555323 MID1O15344 667 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 EPOP01588 193 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 UGT2B4P06133 528 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 SERPINF2P08697 491 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 ACADMP11310 421 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 SERPINA4P29622 427 aa12.81□□□□□ -0.36
SYNE2-219ENST00000555323 TPMTP51580 245 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms