RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 DBN1Q16643 649 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 TIGD7Q6NT04 549 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 CAND1Q86VP6 1230 aaKnown RBP12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 ARHGAP18Q8N392 663 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 NIPA2Q8N8Q9 360 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 NXNL1Q96CM4 212 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 MTFMTQ96DP5 389 aaKnown RBP12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 NSL1Q96IY1 281 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 QKIQ96PU8 341 aaKnown RBP eCLIP12.36□□□□□ -0.433e-7■■■□□ 15.6
ARHGEF40-206ENST00000555232 NMUR2Q9GZQ4 415 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 BRD8Q9H0E9 1235 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
ARHGEF40-206ENST00000555232 A0A1W2PQ67 120 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 C2orf81A6NN90 581 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 IRAK2O43187 625 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 GJB3O75712 270 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 SERPIND1P05546 499 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 NCALDP61601 193 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 SLC5A9Q2M3M2 681 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 FSTL4Q6MZW2 842 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ICA1LQ8NDH6 482 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 OR13C4Q8NGS5 318 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 EBF4Q9BQW3 602 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 POLR1EQ9GZS1 481 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 EPB41L4BQ9H329 900 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ZDHHC6Q9H6R6 413 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 EVLQ9UI08 416 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 HS3ST4Q9Y661 456 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 BCLAF3A2AJT9 711 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ENPP3O14638 875 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ADAM12O43184 909 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 TIMM44O43615 452 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 KPNA2P52292 529 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 RCN1Q15293 331 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 IMPG1Q17R60 797 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 LRRC8EQ6NSJ5 796 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 MIER2Q8N344 545 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 OR4K2Q8NGD2 314 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 VCXQ9H320 206 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ARL5AQ9Y689 179 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 PROCP04070 461 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 CCL5P13501 91 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 IL4RP24394 825 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 PCBP1Q15365 356 aaKnown RBP eCLIP12.35□□□□□ -0.434e-6■■■■□ 25.2
ARHGEF40-206ENST00000555232 PDK4Q16654 411 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 PTPRNQ16849 979 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 MRNIPQ6NTE8 343 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 FAM151BQ6UXP7 276 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 MARK2Q7KZI7 788 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 LRRC43Q8N309 656 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 STK32AQ8WU08 396 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 ATXN2LQ8WWM7 1075 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 SEC14L1Q92503 715 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 DNAJC1Q96KC8 554 aaKnown RBP12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 LRGUKQ96M69 825 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 CFAP97Q9P2B7 532 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 BTRCQ9Y297 605 aa12.35□□□□□ -0.43
ARHGEF40-206ENST00000555232 BTN3A1O00481 513 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 HOXA2O43364 376 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CCDC22O60826 627 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 GLDCP23378 1020 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CDH5P33151 784 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 KLC1Q07866 573 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 HSPA14Q0VDF9 509 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 ARHGEF7Q14155 803 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 ACE2Q9BYF1 805 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 KATNBL1Q9H079 304 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 POMKQ9H5K3 350 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 DCDC2Q9UHG0 476 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CD84Q9UIB8 345 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CPQQ9Y646 472 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 SYNDIG1LA6NDD5 238 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 HACD1B0YJ81 288 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 SMAPO00193 183 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 TLL1O43897 1013 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 TFEBP19484 476 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 RAD51Q06609 339 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 ANO7Q6IWH7 933 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 CNSTQ6PJW8 725 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 TMC5Q6UXY8 1006 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 MILR1Q7Z6M3 343 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 PCDH20Q8N6Y1 951 aaKnown RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 ZSCAN18Q8TBC5 510 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 IL22Q9GZX6 179 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 RXFP1Q9HBX9 757 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 NKX1-2Q9UD57 310 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 TRHDEQ9UKU6 1024 aa12.34□□□□□ -0.43
ARHGEF40-206ENST00000555232 TRIM13O60858 407 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms