RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 RRN3Q9NYV6 651 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 SIRPGQ9P1W8 387 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 PAXBP1Q9Y5B6 917 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 OR51B4Q9Y5P0 310 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 MYO9AB2RTY4 2548 aa13.48□□□□□ -0.25
TUBB3-207ENST00000554927 RNF103O00237 685 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 NTN3O00634 580 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-207ENST00000554927 NEMP1O14524 444 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 SPINT1O43278 529 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 CLDN11O75508 207 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 LEFTY1O75610 366 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 RHOCP08134 193 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 ADRB3P13945 408 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 CR2P20023 1033 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 EEF1GP26641 437 aaKnown RBP13.47□□□□□ -0.25
TUBB3-207ENST00000554927 GGCXP38435 758 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 IRAK1P51617 712 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 SLC6A3Q01959 620 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 NME3Q13232 169 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 AUHQ13825 339 aaKnown RBP13.47□□□□□ -0.25
TUBB3-207ENST00000554927 PTK2BQ14289 1009 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 CLCA4Q14CN2 919 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 TAF5Q15542 800 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 KIF26BQ2KJY2 2108 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 FAXCQ5TGI0 409 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 LINGO4Q6UY18 593 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 SLC47A2Q86VL8 602 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 FAM71AQ8IYT1 594 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 WDTC1Q8N5D0 677 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 SLC2A13Q96QE2 648 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
TUBB3-207ENST00000554927 GEMIN8Q9NWZ8 242 aaKnown RBP13.47□□□□□ -0.25
TUBB3-207ENST00000554927 ACSL6Q9UKU0 697 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 STAP1Q9ULZ2 295 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 LOXL2Q9Y4K0 774 aa13.47□□□□□ -0.25
TUBB3-207ENST00000554927 COL27A1Q8IZC6 1860 aaPredicted RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 NOTCH2Q04721 2471 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SPTAN1Q13813 2472 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 D6RAR5 112 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 LMO7DNF2Z398 122 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 GOLGA6L22H0YM25 854 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 M0QYT0 321 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 NVLO15381 856 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 YY2O15391 372 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SMAD6O43541 496 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 GRAP2O75791 330 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 F9P00740 461 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 IGLV3-25P01717 112 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 RPLP0P05388 317 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 CLCN1P35523 988 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 DNA2P51530 1060 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 RNASE9P60153 205 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 CCL7P80098 99 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 TCEA2Q15560 299 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 IGFBP7Q16270 282 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SKIDA1Q1XH10 827 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 FKBP15Q5T1M5 1219 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 DPY19L3Q6ZPD9 716 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 FAM183BPQ6ZVS7 135 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 ZFAND4Q86XD8 727 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SDR16C5Q8N3Y7 309 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 ANKRD20A12PQ8NF67 263 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SCG3Q8WXD2 468 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 TMEM74Q96NL1 305 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 GBP4Q96PP9 640 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 LRRC61Q9BV99 259 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 CPEB1Q9BZB8 566 aaKnown RBP13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SIK2Q9H0K1 926 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 WDCPQ9H6R7 721 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 VPS51Q9UID3 782 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 FADS3Q9Y5Q0 445 aa13.46□□□□□ -0.25
TUBB3-207ENST00000554927 PRAMEF33A0A0G2JMD5 474 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 PRAMEF10O60809 474 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 DAB1O75553 588 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ADCY5O95622 1261 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ERBB2P04626 1255 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 TSHRP16473 764 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ITIH1P19827 911 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 CLCN6P51797 869 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 MAPK10P53779 464 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 CDH4P55283 916 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 TCP11X2Q5H9J9 407 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-207ENST00000554927 KLHDC7AQ5VTJ3 777 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 OLFML1Q6UWY5 402 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 LRRC31Q6UY01 552 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ARL10Q8N8L6 244 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 KYQ8NBH2 561 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
TUBB3-207ENST00000554927 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 C18orf8Q96DM3 657 aa13.45□□□□□ -0.26
TUBB3-207ENST00000554927 LENG8Q96PV6 779 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms