RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 PSMD3O43242 534 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SLC7A4O43246 635 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SMAD6O43541 496 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF821O75541 412 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 GCATO75600 419 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ANXA9O76027 345 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 JCHAINP01591 159 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 HLA-EP13747 358 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 VAV1P15498 845 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CR2P20023 1033 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ITGB7P26010 798 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PTPN3P26045 913 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 RBL1P28749 1068 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 OXTRP30559 389 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CNR2P34972 360 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SCNN1BP51168 640 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 COPAP53621 1224 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PTPN5P54829 565 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SATB1Q01826 763 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 BCL2L1Q07817 233 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ITKQ08881 620 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 MPP3Q13368 585 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PRPSAP1Q14558 356 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CYTH1Q15438 398 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SIX1Q15475 284 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 MYLK3Q32MK0 819 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CFAP58Q5T655 872 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 BRAT1Q6PJG6 821 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CCDC137Q6PK04 289 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TMEM92Q6UXU6 159 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 DPY19L3Q6ZPD9 716 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ARHGEF18Q6ZSZ5 1173 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SYDE1Q6ZW31 735 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PID1Q7Z2X4 250 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF572Q7Z3I7 529 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SRLQ86TD4 932 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TMPRSS6Q8IU80 811 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TP53INP2Q8IXH6 220 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 RYBPQ8N488 228 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TMEM105Q8N8V8 129 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CCDC89Q8N998 374 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TSEN2Q8NCE0 465 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 MNS1Q8NEH6 495 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 MAGOHBQ96A72 148 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 RAB7BQ96AH8 199 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SIPA1Q96FS4 1042 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SPACA7Q96KW9 195 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SPATA13Q96N96 652 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SRPK1Q96SB4 655 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SLC25A51Q9H1U9 297 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 GBA3Q9H227 469 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 KDM4CQ9H3R0 1056 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 ZDHHC6Q9H6R6 413 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 CD248Q9HCU0 757 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 FAM86C1Q9NVL1 165 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PAK5Q9P286 719 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 BCCIPQ9P287 314 aaKnown RBP eCLIP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 SAE1Q9UBE0 346 aaPredicted RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 DKK3Q9UBP4 350 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 PLXNB3Q9ULL4 1909 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 NCKAP1Q9Y2A7 1128 aa8.16□□□□□ -1.1
LINC01397-201ENST00000554808 AAR2Q9Y312 384 aaKnown RBP8.16□□□□□ -1.1
LINC01397-201ENST00000554808 TMEM131Q92545 1883 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 TCRBV7S2A1N4TA0A589 114 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 K7ERQ8 282 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 GALR2O43603 387 aaPredicted RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PI15O43692 258 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 BNIP3LO60238 219 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 LEFTY1O75610 366 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 URI1O94763 535 aaPredicted RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 IL1BP01584 269 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 IGLV3-19P01714 112 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 HLA-DQB2P05538 268 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 GABRG2P18507 467 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 NDUFV2P19404 249 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 FDFT1P37268 417 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 COILP38432 576 aaPredicted RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 WASP42768 502 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 GEMP55040 296 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 RPL26P61254 145 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ELP6Q0PNE2 266 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 WASHC5Q12768 1159 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZBTB17Q13105 803 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 DHX34Q14147 1143 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 CST6Q15828 149 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF805Q5CZA5 627 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 DNTTIP2Q5QJE6 756 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ANKRD20A2Q5SQ80 823 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ANKRD20A1Q5TYW2 823 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ANKRD20A3Q5VUR7 823 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 KIAA1211LQ6NV74 962 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 PKN3Q6P5Z2 889 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 NCEH1Q6PIU2 408 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZC3H14Q6PJT7 736 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 SLC36A4Q6YBV0 504 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 GSTA5Q7RTV2 222 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ADAT2Q7Z6V5 191 aaKnown RBP8.15□□□□□ -1.1
LINC01397-201ENST00000554808 WDR5BQ86VZ2 330 aa8.15□□□□□ -1.1
LINC01397-201ENST00000554808 ZNF567Q8N184 647 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms