RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 LLGL1Q15334 1064 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 ANKS3Q6ZW76 656 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 PHLDB2Q86SQ0 1253 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 PIP4K2CQ8TBX8 421 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 JADE3Q92613 823 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 TMEM176AQ96HP8 235 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 RNF157Q96PX1 679 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 TMEM120AQ9BXJ8 343 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 OSBPL1AQ9BXW6 950 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 CADM1Q9BY67 442 aaKnown RBP11.32□□□□□ -0.6
SRP54-205ENST00000554803 EIF2B3Q9NR50 452 aaKnown RBP11.32□□□□□ -0.6
SRP54-205ENST00000554803 PDP2Q9P2J9 529 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 TRIM33Q9UPN9 1127 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 NME7Q9Y5B8 376 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 SNX9Q9Y5X1 595 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 PLXND1Q9Y4D7 1925 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 A0A0G2JND7 137 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 A8MUI8 341 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 KPNA7A9QM74 516 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 H0Y626 953 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 KHNYNO15037 678 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 MAP3K7O43318 606 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 HCRTO43612 131 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 CILPO75339 1184 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 GCATO75600 419 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 TMEM63AO94886 807 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ABLIM3O94929 683 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 KLHL2O95198 593 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 TRIM16O95361 564 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 PSMG1O95456 288 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ZBED1O96006 694 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SERPINA6P08185 405 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 GRK2P25098 689 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 RPL9P32969 192 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 FDFT1P37268 417 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ELK3P41970 407 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 MAGEA3P43357 314 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 YWHAGP61981 247 aaKnown RBP eCLIP11.31□□□□□ -0.6
SRP54-205ENST00000554803 AP2B1P63010 937 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ORC1Q13415 861 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 FRG1Q14331 258 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 INSCQ1MX18 579 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SOWAHAQ2M3V2 549 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SV2CQ496J9 727 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SLC9A4Q6AI14 798 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 DENND1BQ6P3S1 775 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 LCLAT1Q6UWP7 414 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 WDR75Q8IWA0 830 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 CAMKK1Q8N5S9 505 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 FAM71DQ8N9W8 422 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ZNF461Q8TAF7 563 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 GSDMBQ8TAX9 411 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ZFAND2BQ8WV99 257 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SREK1Q8WXA9 508 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 TFAP2BQ92481 460 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 CDKL2Q92772 493 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 RSPRY1Q96DX4 576 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SRPK1Q96SB4 655 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 MRPL45Q9BRJ2 306 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 SLC32A1Q9H598 525 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ZWILCHQ9H900 591 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 KIF9Q9HAQ2 790 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 MRGBPQ9NV56 204 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 THAP1Q9NVV9 213 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 ZC3H7BQ9UGR2 993 aaKnown RBP11.31□□□□□ -0.6
SRP54-205ENST00000554803 TAGLN3Q9UI15 199 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 SLC8A2Q9UPR5 921 aa11.31□□□□□ -0.6
SRP54-205ENST00000554803 GOLGA4Q13439 2230 aaKnown RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 MAGEA13PA6NCF6 341 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 FAM159BA6NKW6 160 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 C2CD4BA6NLJ0 364 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 FCHO1O14526 889 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 ATG13O75143 517 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 H2AFYO75367 372 aaKnown RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 NEBLO76041 1014 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TM7SF2O76062 418 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 CBX6O95503 412 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
SRP54-205ENST00000554803 ETS1P14921 441 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 TCF4P15884 667 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 IL1R2P27930 398 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 PRDX6P30041 224 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 PNPLA4P41247 253 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 EPHA5P54756 1037 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 CDH6P55285 790 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 KRT81Q14533 505 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 UAP1L1Q3KQV9 507 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 KBTBD12Q3ZCT8 623 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 MSS51Q4VC12 460 aa11.3□□□□□ -0.6
SRP54-205ENST00000554803 ZNF394Q53GI3 561 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms