RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 RAD51BO15315 384 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 FGF10O15520 208 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-221ENST00000554453 SIGLEC6O43699 453 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 PIAS2O75928 621 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 TMCC1O94876 653 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 FTLP02792 175 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-221ENST00000554453 GIMD1P0DJR0 217 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 TIMP2P16035 220 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 DESP17661 470 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 ACP1P24666 158 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 PRKCIP41743 596 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 ZNF165P49910 485 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 E2F1Q01094 437 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 CYP4F3Q08477 520 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-221ENST00000554453 IQCB1Q15051 598 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 CYTH1Q15438 398 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 PARP15Q460N3 678 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 ERMARDQ5T6L9 678 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 GDPD4Q6W3E5 623 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 LEKR1Q6ZMV7 388 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
ABCD4-221ENST00000554453 TMC6Q7Z403 805 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 TTC7BQ86TV6 843 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 OR6K2Q8NGY2 324 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 OR4C6Q8NH72 309 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 MDM1Q8TC05 714 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 HCAR2Q8TDS4 363 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 FNIP1Q8TF40 1166 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 ARHGEF26Q96DR7 871 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 HMCESQ96FZ2 354 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 EIF3CQ99613 913 aaKnown RBP11.28□□□□□ -0.6
ABCD4-221ENST00000554453 HAUS4Q9H6D7 363 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 FZD3Q9NPG1 666 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 DKK3Q9UBP4 350 aa11.28□□□□□ -0.6
ABCD4-221ENST00000554453 CFAP47Q6ZTR5 3102 aa11.27□□□□□ -0.6
ABCD4-221ENST00000554453 ADAMTS20P59510 1910 aa11.27□□□□□ -0.6
ABCD4-221ENST00000554453 SPTY2D1-AS1A0A0U1RR47 76 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 NEMP2A6NFY4 417 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 LRRC53A6NM62 1247 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 TMCO5BA8MYB1 307 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 DDX3XO00571 662 aaKnown RBP eCLIP11.27□□□□□ -0.613e-9■■■■□ 23.7
ABCD4-221ENST00000554453 NEMP1O14524 444 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 SCAMP1O15126 338 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 SDC3O75056 442 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 CSF2P04141 144 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 UGT2B4P06133 528 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 PSMA2P25787 234 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 ABL2P42684 1182 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 RABIFP47224 123 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 NDST2P52849 883 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 HNRNPKP61978 463 aaKnown RBP eCLIP11.27□□□□□ -0.611e-7■■■■□ 26.3
ABCD4-221ENST00000554453 FZD2Q14332 565 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 ASIC2Q16515 512 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 ATXN7L2Q5T6C5 722 aaPredicted RBP11.27□□□□□ -0.61
ABCD4-221ENST00000554453 KYAT3Q6YP21 454 aaKnown RBP11.27□□□□□ -0.61
ABCD4-221ENST00000554453 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 RFFLQ8WZ73 363 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 CENPTQ96BT3 561 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 GDAP1L1Q96MZ0 367 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 NCAPGQ9BPX3 1015 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 FUCA2Q9BTY2 467 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 CALN1Q9BXU9 219 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 UCKL1Q9NWZ5 548 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 CSNK1G3Q9Y6M4 447 aa11.27□□□□□ -0.61
ABCD4-221ENST00000554453 PTPRQQ9UMZ3 2332 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 ARHGEF17Q96PE2 2063 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-221ENST00000554453 ARHGAP42A6NI28 874 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 TOR1BO14657 336 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 FPGTO14772 594 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 SPINT1O43278 529 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 RNF8O76064 485 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 IGSF6O95976 241 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 HNF1BP35680 557 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 CSNK1DP48730 415 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 HCAR3P49019 387 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 SUOXP51687 545 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 TPI1P60174 286 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 PFN3P60673 137 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 RHOAP61586 193 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 KLHL30Q0D2K2 578 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 GRM3Q14832 879 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 FIGNQ5HY92 759 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 CAVIN1Q6NZI2 390 aaKnown RBP11.26□□□□□ -0.61
ABCD4-221ENST00000554453 PSTKQ8IV42 348 aaKnown RBP11.26□□□□□ -0.61
ABCD4-221ENST00000554453 SLC22A18ASQ8N1D0 253 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 FAM181AQ8N9Y4 354 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 DENND6BQ8NEG7 585 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 SLC39A8Q9C0K1 460 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 NLGN3Q9NZ94 848 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 LHX3Q9UBR4 397 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 UBA2Q9UBT2 640 aaPredicted RBP11.26□□□□□ -0.61
ABCD4-221ENST00000554453 IPO11Q9UI26 975 aaKnown RBP11.26□□□□□ -0.61
ABCD4-221ENST00000554453 AP4E1Q9UPM8 1137 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 GPSM3Q9Y4H4 160 aa11.26□□□□□ -0.61
ABCD4-221ENST00000554453 J3KR12 359 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms