RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 MVB12BQ9H7P6 319 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 BABAM1Q9NWV8 329 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 ARHGAP26Q9UNA1 814 aa5.33□□□□□ -1.56
SCFD1-211ENST00000554437 TSPAN4O14817 238 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 NTN1O95631 604 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 LIFRP42702 1097 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 PAFAH1B1P43034 410 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 RFX5P48382 616 aaPredicted RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 CENPAP49450 140 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 YWHAZP63104 245 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 EFNB1P98172 346 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 ROR2Q01974 943 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 CAPSQ13938 189 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 BAK1Q16611 211 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 DNTTIP2Q5QJE6 756 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 SLC9C2Q5TAH2 1124 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 Q6ZSV7 163 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 FAM160B2Q86V87 743 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 OIT3Q8WWZ8 545 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 ST8SIA4Q92187 359 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 RNF125Q96EQ8 232 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 YME1L1Q96TA2 773 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 MPHOSPH8Q99549 860 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 NPFFR1Q9GZQ6 430 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 MRPL44Q9H9J2 332 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 SPATS2LQ9NUQ6 558 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 HIF1ANQ9NWT6 349 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 HCN3Q9P1Z3 774 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 PGAP2Q9UHJ9 254 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 SRPRBQ9Y5M8 271 aaKnown RBP5.32□□□□□ -1.56
SCFD1-211ENST00000554437 SCINQ9Y6U3 715 aa5.32□□□□□ -1.56
SCFD1-211ENST00000554437 ADGRF5Q8IZF2 1346 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 A0A1B0GVT2 93 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-211ENST00000554437 TYW5A2RUC4 315 aaKnown RBP5.31□□□□□ -1.56
SCFD1-211ENST00000554437 GAGE10A6NGK3 116 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 A6NLC8 198 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 SPTLC2O15270 562 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 RGS14O43566 566 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 SPRY3O43610 288 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 LDB2O43679 373 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 LCATP04180 440 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 SLC2A4P14672 509 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 THPOP40225 353 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 CYP4A11Q02928 519 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 GPS2Q13227 327 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 RUNX2Q13950 521 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 ZNF284Q2VY69 593 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 PLEKHO1Q53GL0 409 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-211ENST00000554437 FSCBQ5H9T9 825 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 FNBP1LQ5T0N5 605 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 CES5AQ6NT32 575 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 C9orf47Q6ZRZ4 202 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 MON1BQ7L1V2 547 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 TCP11L2Q8N4U5 519 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 PLD5Q8N7P1 536 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 TEX45Q8NA69 505 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 MCPH1Q8NEM0 835 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 TMEM163Q8TC26 289 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 KIF1BPQ96EK5 621 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 CAMK1GQ96NX5 476 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 VEZTQ9HBM0 779 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 SNTG1Q9NSN8 517 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 PPP1R14DQ9NXH3 145 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 SLC25A10Q9UBX3 287 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-211ENST00000554437 FZD10Q9ULW2 581 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 PTGDR2Q9Y5Y4 395 aa5.31□□□□□ -1.56
SCFD1-211ENST00000554437 A0A1B0GVC2 190 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 OR6C75A6NL08 312 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 INAFM1C9JVW0 142 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 CHL1O00533 1208 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 VWA5AO00534 786 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 EBAG9O00559 213 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 ATP2C2O75185 946 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 SNHG28P0DPA3 235 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 GNLYP22749 145 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 ARRB2P32121 409 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 TTKP33981 857 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 CLCN5P51795 746 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 UFM1P61960 85 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 LPIN1Q14693 890 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 FAM69AQ5T7M9 428 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 SERTAD4-AS1Q5TG53 156 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 CCDC70Q6NSX1 233 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 TMEM81Q6P7N7 255 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 RRM2BQ7LG56 351 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 TADA2BQ86TJ2 420 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 GPAT4Q86UL3 456 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 DENND6AQ8IWF6 608 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 TEX19Q8NA77 164 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 MIGA1Q8NAN2 632 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 IL17REQ8NFR9 667 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 RRP36Q96EU6 259 aaKnown RBP5.3□□□□□ -1.56
SCFD1-211ENST00000554437 PAIP1Q9H074 479 aaKnown RBP5.3□□□□□ -1.56
SCFD1-211ENST00000554437 CDT1Q9H211 546 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 UBN1Q9NPG3 1134 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 PLK2Q9NYY3 685 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 KIAA1456Q9P272 454 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 RAI2Q9Y5P3 530 aa5.3□□□□□ -1.56
SCFD1-211ENST00000554437 CYP46A1Q9Y6A2 500 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms