RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CDH23Q9H251 3354 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 DPH5Q9H2P9 285 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TFB2MQ9H5Q4 396 aaKnown RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 CNTD2Q9H8S5 307 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 COPS7BQ9H9Q2 264 aaPredicted RBP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGEF4Q9NR80 690 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 MARCH5Q9NX47 278 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.77□□□□□ -1.97
PRPF39-206ENST00000554429 RGL1Q9NZL6 768 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 BAIAP2L1Q9UHR4 511 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 TSC2P49815 1807 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 OBSL1O75147 1896 aa2.77□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1W2PQH9 124 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FIGNL2A6NMB9 653 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 L7N2F9 121 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SULT1B1O43704 296 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SPOPO43791 374 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CCNT1O60563 726 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EXOC3O60645 756 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DNAJB6O75190 326 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PDGFBP01127 241 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 HLA-DRAP01903 254 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 AFPP02771 609 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TPOP07202 933 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PABPC4LP0CB38 370 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EPB41P11171 864 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANXA8P13928 327 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EDN3P14138 238 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 NCF1P14598 390 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 GCFC2P16383 781 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 BPIP17213 487 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CCNA2P20248 432 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SYT1P21579 422 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 IL10P22301 178 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PRKACBP22694 351 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MARK3P27448 753 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 GNA11P29992 359 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 GBX2P52951 348 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF445P59923 1031 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 POLR2GP62487 172 aaKnown RBP eCLIP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RPS26P62854 115 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TPM4P67936 248 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SHC2P98077 582 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 BFSP1Q12934 665 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RPA4Q13156 261 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 KCNAB2Q13303 367 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RIPK1Q13546 671 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 UBE2SQ16763 222 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD20A4Q4UJ75 823 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PAN2Q504Q3 1202 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD20A8PQ5CZ79 823 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD20A2Q5SQ80 823 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CLVS2Q5SYC1 327 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD20A1Q5TYW2 823 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PIK3R6Q5UE93 754 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANXA8L1Q5VT79 327 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ANKRD20A3Q5VUR7 823 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 IZUMO3Q5VZ72 239 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EFCAB12Q6NXP0 572 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PGBD2Q6P3X8 592 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLC30A9Q6PML9 568 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SEZ6L2Q6UXD5 910 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 KDM7AQ6ZMT4 941 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MTSS1LQ765P7 747 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SZRD1Q7Z422 152 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MOGAT3Q86VF5 341 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 GLB1L3Q8NCI6 653 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DENND6BQ8NEG7 585 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CYP2W1Q8TAV3 490 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TRAPPC12Q8WVT3 735 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ST8SIA4Q92187 359 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RAB7BQ96AH8 199 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SIPA1Q96FS4 1042 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 LPIN3Q9BQK8 851 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PYM1Q9BRP8 204 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF577Q9BSK1 485 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 BTBD2Q9BX70 525 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 RNF26Q9BY78 433 aaPredicted RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 CD244Q9BZW8 370 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MS4A5Q9H3V2 200 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DHX33Q9H6R0 707 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 KCNK12Q9HB15 430 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SPACA1Q9HBV2 294 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 MRPL47Q9HD33 250 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 C8orf4Q9NR00 106 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 EIF2B3Q9NR50 452 aaKnown RBP2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TPSG1Q9NRR2 321 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 FAM105AQ9NUU6 356 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SPTLC3Q9NUV7 552 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 TBC1D13Q9NVG8 400 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 COX16Q9P0S2 106 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DSEQ9UL01 958 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF510Q9Y2H8 683 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SIK3Q9Y2K2 1263 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 DTNAQ9Y4J8 743 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SLC12A7Q9Y666 1083 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 PIAS3Q9Y6X2 628 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 LOC105371267A0A1B0GV96 52 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 A0A1W2PRV1 198 aa2.76□□□□□ -1.97
PRPF39-206ENST00000554429 SMIM30A4D0T7 59 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms