RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 CXCR3P49682 368 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 PEX5P50542 639 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 METAP1P53582 386 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 DEUP1Q05D60 604 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 NME3Q13232 169 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 POM121L1PQ3SYA9 428 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 ATP13A4Q4VNC1 1196 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 FAM131BQ86XD5 332 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 SPATS2Q86XZ4 545 aaKnown RBP14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 CCDC185Q8N715 623 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 ATP6V0D2Q8N8Y2 350 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 MFSD2AQ8NA29 543 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 ALG3Q92685 438 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 BTN2A3PQ96KV6 586 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 FAM204AQ9H8W3 233 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 ERVMER34-1Q9H9K5 563 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 DNAI1Q9UI46 699 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 JRKLQ9Y4A0 524 aa14.3□□□□□ -0.12
SPTLC2-202ENST00000554365 SYNJ2BP-COX16A0A087WUM0 186 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 LATO43561 262 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 SDC3O75056 442 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 RNF8O76064 485 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 TNNT1P13805 278 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 CKMT2P17540 419 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 RXRGP48443 463 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 C19orf57Q0VDD7 668 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC12A1Q13621 1099 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 STAT4Q14765 748 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 RTP5Q14D33 572 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 ACCSLQ4AC99 568 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 ARTNQ5T4W7 220 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 LRRC38Q5VT99 294 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 OR8D1Q8WZ84 308 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC39A7Q92504 469 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 MAGEB5Q9BZ81 275 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 NRSN2Q9GZP1 204 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 PRORYQ9H606 182 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 COX16Q9P0S2 106 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 PCSK1NQ9UHG2 260 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC12A6Q9UHW9 1150 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 PCDHA3Q9Y5H8 950 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 RAI2Q9Y5P3 530 aa14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 NYNRINQ9P2P1 1898 aaKnown RBP14.29□□□□□ -0.12
SPTLC2-202ENST00000554365 KCNU1A8MYU2 1149 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 PSTPIP1O43586 416 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 BNIP3LO60238 219 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 MAGEC1O60732 1142 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 F9P00740 461 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 RARAP10276 462 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 GLDCP23378 1020 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 ARSEP51690 589 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 SULT2A1Q06520 285 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 ILKQ13418 452 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 CA9Q16790 459 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 RABGAP1LQ5R372 815 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 FAM46CQ5VWP2 391 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 PAPD7Q5XG87 772 aaKnown RBP14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 POLNQ7Z5Q5 900 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 DSG4Q86SJ6 1040 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 IQCHQ86VS3 1027 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 RHOT1Q8IXI2 618 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 FRS2Q8WU20 508 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 RNF34Q969K3 372 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 NTAN1Q96AB6 310 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 FCRL3Q96P31 734 aaPredicted RBP14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 NAPGQ99747 312 aaPredicted RBP14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 NCAPGQ9BPX3 1015 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 SNRNP25Q9BV90 132 aaKnown RBP14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 KDM4CQ9H3R0 1056 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 ZWILCHQ9H900 591 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 ARHGEF38Q9NXL2 777 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 SLC25A13Q9UJS0 675 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 SARDHQ9UL12 918 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 FZD10Q9ULW2 581 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 CLCA2Q9UQC9 943 aa14.28□□□□□ -0.12
SPTLC2-202ENST00000554365 A0A1B0GVM2 712 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 CCDC66A2RUB6 948 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 TCAF2A6NFQ2 919 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 C3orf70A6NLC5 250 aaPredicted RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 MIF4GDA9UHW6 222 aaKnown RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 KIF2AO00139 706 aaPredicted RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 SLC7A4O43246 635 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 PLRG1O43660 514 aaKnown RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 PRPSAP2O60256 369 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 BRINP1O60477 761 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 TUBB4AP04350 444 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 SSR1P43307 286 aaKnown RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 RPS6KA1Q15418 735 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 SMTNL2Q2TAL5 461 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 BRMS1LQ5PSV4 323 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 TTC39BQ5VTQ0 682 aaPredicted RBP14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 SCYL2Q6P3W7 929 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 KDM7AQ6ZMT4 941 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 KANSL1Q7Z3B3 1105 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 UBE2Q2Q8WVN8 375 aa14.27□□□□□ -0.13
SPTLC2-202ENST00000554365 TEKT4Q8WW24 435 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms