RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 CSF2P04141 144 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 GIMD1P0DJR0 217 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 ALPPL2P10696 532 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FERP16591 822 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 DESP17661 470 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 RABIFP47224 123 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF165P49910 485 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 DNA2P51530 1060 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 SUOXP51687 545 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CLDN2P57739 230 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 INSM1Q01101 510 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 UBXN1Q04323 297 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 RAD51Q06609 339 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CYP4F3Q08477 520 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TARDBPQ13148 414 aaKnown RBP eCLIP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 SGCGQ13326 291 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FGL2Q14314 439 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 GRM3Q14832 879 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 NCAPHQ15003 741 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 MYLK3Q32MK0 819 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 PARP15Q460N3 678 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CCDC157Q569K6 752 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 EFHC2Q5JST6 749 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 PPP1R15BQ5SWA1 713 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 HES3Q5TGS1 186 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FAM72AQ5TYM5 149 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 ACAD10Q6JQN1 1059 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FAM72DQ6L9T8 149 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 DNAJC24Q6P3W2 148 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 WDR59Q6PJI9 974 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 PARGQ86W56 976 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FAM72BQ86X60 149 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 UMODL1-AS1Q8N2C9 162 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 HCAR2Q8TDS4 363 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 KLK6Q92876 244 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 BMFQ96LC9 184 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 GDAP1L1Q96MZ0 367 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 KLF6Q99612 283 aaPredicted RBP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 EPAS1Q99814 870 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 AGPAT1Q99943 283 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CNPY3Q9BT09 278 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 SYT11Q9BT88 431 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 DUSP23Q9BVJ7 150 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CALN1Q9BXU9 219 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CPEB1Q9BZB8 566 aaKnown RBP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TM6SF2Q9BZW4 377 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TTYH3Q9C0H2 523 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 HSD3B7Q9H2F3 369 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 NOL6Q9H6R4 1146 aaKnown RBP6.71□□□□□ -1.34
SLIRP-203ENST00000554074 ZDHHC6Q9H6R6 413 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CATSPERBQ9H7T0 1116 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 NCKIPSDQ9NZQ3 722 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 DNAI1Q9UI46 699 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 FZD10Q9ULW2 581 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 CA5BQ9Y2D0 317 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 LOC400499M0QZD8 3231 aa6.71□□□□□ -1.34
SLIRP-203ENST00000554074 TSPAN11A1L157 253 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SYCE3A1L190 88 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 POM121BA6NF01 834 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 IGLON5A6NGN9 336 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 C16orf96A6NNT2 1141 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 H3BM21 787 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 KRIT1O00522 736 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 FPGTO14772 594 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SPINT1O43278 529 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 BUB1O43683 1085 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SDC3O75056 442 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 TMCC1O94876 653 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 GJB6O95452 261 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 IGSF6O95976 241 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PAK4O96013 591 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 UGT2B4P06133 528 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 CDK11BP21127 795 aaKnown RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 EPHB2P29323 1055 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 ABL2P42684 1182 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 DUSP3P51452 185 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 ZNF135P52742 658 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 NDST2P52849 883 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PFN3P60673 137 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 RPL7AP62424 266 aaKnown RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 YPEL5P62699 121 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 DAB2P98082 770 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SERINC3Q13530 473 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PTK2BQ14289 1009 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 FZD2Q14332 565 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 COL28A1Q2UY09 1125 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 ANO6Q4KMQ2 910 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 CDCP2Q5VXM1 449 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 ZCCHC8Q6NZY4 707 aaKnown RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 GDPD4Q6W3E5 623 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 IRF2BP2Q7Z5L9 587 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PTAR1Q7Z6K3 402 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 PDZD3Q86UT5 571 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 MARCH9Q86YJ5 346 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 MCOLN2Q8IZK6 566 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 RYBPQ8N488 228 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 SNIP1Q8TAD8 396 aaKnown RBP6.7□□□□□ -1.34
SLIRP-203ENST00000554074 FNIP1Q8TF40 1166 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 BTN2A2Q8WVV5 523 aa6.7□□□□□ -1.34
SLIRP-203ENST00000554074 BAP1Q92560 729 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms