RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PTPN20Q4JDL3 420 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 BRMS1LQ5PSV4 323 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 FAM102AQ5T9C2 384 aaPredicted RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 RETSATQ6NUM9 610 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 GCNT7Q6ZNI0 430 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 Q6ZSR6 202 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZNF771Q7L3S4 317 aaPredicted RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 SLC26A9Q7LBE3 791 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZNF605Q86T29 641 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 SETD3Q86TU7 594 aaPredicted RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 LSMEM2Q8N112 164 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 CACTIN-AS1Q8N1I8 211 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 RYBPQ8N488 228 aaPredicted RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 WDTC1Q8N5D0 677 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 CHST14Q8NCH0 376 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 OR2A12Q8NGT7 310 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MAPK15Q8TD08 544 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 KCNE4Q8WWG9 221 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 APOLD1Q96LR9 279 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZNF578Q96N58 590 aaPredicted RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 PSMB7Q99436 277 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ATP13A1Q9HD20 1204 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 ZNHIT6Q9NWK9 470 aaKnown RBP9.01□□□□□ -0.97
TDP1-208ENST00000553989 RRN3Q9NYV6 651 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 NLGN3Q9NZ94 848 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MPP6Q9NZW5 540 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 OR51B4Q9Y5P0 310 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 SNX10Q9Y5X0 201 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 MYLKQ15746 1914 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 SHROOM3Q8TF72 1996 aa9.01□□□□□ -0.97
TDP1-208ENST00000553989 A0A0D9SEW6 157 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CPED1A4D0V7 1026 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CCDC151A5D8V7 595 aa9□□□□□ -0.97
TDP1-208ENST00000553989 NEMP1O14524 444 aa9□□□□□ -0.97
TDP1-208ENST00000553989 TEX33O43247 280 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
TDP1-208ENST00000553989 OPA1O60313 960 aa9□□□□□ -0.97
TDP1-208ENST00000553989 C1QL1O75973 258 aa9□□□□□ -0.97
TDP1-208ENST00000553989 NEBLO76041 1014 aa9□□□□□ -0.97
TDP1-208ENST00000553989 F9P00740 461 aa9□□□□□ -0.97
TDP1-208ENST00000553989 PNMA6AP0CW24 399 aaPredicted RBP9□□□□□ -0.97
TDP1-208ENST00000553989 HOXB1P14653 301 aaPredicted RBP9□□□□□ -0.97
TDP1-208ENST00000553989 UCNP55089 124 aa9□□□□□ -0.97
TDP1-208ENST00000553989 TMPRSS3P57727 454 aa9□□□□□ -0.97
TDP1-208ENST00000553989 RPS21P63220 83 aaKnown RBP9□□□□□ -0.97
TDP1-208ENST00000553989 SGCGQ13326 291 aa9□□□□□ -0.97
TDP1-208ENST00000553989 RAPGEF1Q13905 1077 aa9□□□□□ -0.97
TDP1-208ENST00000553989 KRT31Q15323 416 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CDKN3Q16667 212 aa9□□□□□ -0.97
TDP1-208ENST00000553989 C3orf38Q5JPI3 329 aa9□□□□□ -0.97
TDP1-208ENST00000553989 ARHGAP40Q5TG30 622 aa9□□□□□ -0.97
TDP1-208ENST00000553989 KIAA1161Q6NSJ0 714 aa9□□□□□ -0.97
TDP1-208ENST00000553989 FOXR1Q6PIV2 292 aa9□□□□□ -0.97
TDP1-208ENST00000553989 DPY19L3Q6ZPD9 716 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SLC47A2Q86VL8 602 aa9□□□□□ -0.97
TDP1-208ENST00000553989 PARGQ86W56 976 aa9□□□□□ -0.97
TDP1-208ENST00000553989 ZDHHC17Q8IUH5 632 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CCDC170Q8IYT3 715 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SLC22A18ASQ8N1D0 253 aa9□□□□□ -0.97
TDP1-208ENST00000553989 TXLNBQ8N3L3 684 aa9□□□□□ -0.97
TDP1-208ENST00000553989 TMEM35BQ8NCS4 154 aa9□□□□□ -0.97
TDP1-208ENST00000553989 OR7D4Q8NG98 312 aa9□□□□□ -0.97
TDP1-208ENST00000553989 FAM174AQ8TBP5 190 aa9□□□□□ -0.97
TDP1-208ENST00000553989 IFI44Q8TCB0 444 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CPLX3Q8WVH0 158 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SHC3Q92529 594 aa9□□□□□ -0.97
TDP1-208ENST00000553989 FEM1CQ96JP0 617 aa9□□□□□ -0.97
TDP1-208ENST00000553989 PKNOX2Q96KN3 472 aa9□□□□□ -0.97
TDP1-208ENST00000553989 HDAC8Q9BY41 377 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SLC17A9Q9BYT1 436 aa9□□□□□ -0.97
TDP1-208ENST00000553989 ZDHHC6Q9H6R6 413 aa9□□□□□ -0.97
TDP1-208ENST00000553989 SYNDIG1Q9H7V2 258 aa9□□□□□ -0.97
TDP1-208ENST00000553989 USP29Q9HBJ7 922 aa9□□□□□ -0.97
TDP1-208ENST00000553989 THSD1Q9NS62 852 aa9□□□□□ -0.97
TDP1-208ENST00000553989 ARHGEF38Q9NXL2 777 aa9□□□□□ -0.97
TDP1-208ENST00000553989 DNAJC12Q9UKB3 198 aa9□□□□□ -0.97
TDP1-208ENST00000553989 CAPN11Q9UMQ6 739 aa9□□□□□ -0.97
TDP1-208ENST00000553989 ZFR2Q9UPR6 939 aaKnown RBP9□□□□□ -0.97
TDP1-208ENST00000553989 LUC7L2Q9Y383 392 aaKnown RBP9□□□□□ -0.97
TDP1-208ENST00000553989 EPN1Q9Y6I3 576 aaPredicted RBP9□□□□□ -0.97
TDP1-208ENST00000553989 GOLGA8SH3BPF8 625 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 K7ESM1 405 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 ERVH48-1M5A8F1 160 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 PES1O00541 588 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 FPGTO14772 594 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 SCAMP1O15126 338 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 KLK10O43240 276 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 PAK4O96013 591 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 GP1BAP07359 652 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 ADRB3P13945 408 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 TFE3P19532 575 aaPredicted RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 ITGB7P26010 798 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 PON1P27169 355 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
TDP1-208ENST00000553989 CASP14P31944 242 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 RABIFP47224 123 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 CXCR3P49682 368 aa8.99□□□□□ -0.97
TDP1-208ENST00000553989 SERPINH1P50454 418 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms