RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DMC1Q14565 340 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SAFBQ15424 915 aaKnown RBP eCLIP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF77Q15935 545 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MAPK6Q16659 721 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 COL28A1Q2UY09 1125 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 DCAF4L1Q3SXM0 396 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 C19orf54Q5BKX5 351 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF362Q5T0B9 420 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TPGS2Q68CL5 300 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 GALNT17Q6IS24 598 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CRELD2Q6UXH1 353 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RTL10Q7L3V2 364 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CACNA2D4Q7Z3S7 1137 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PIP4P1Q86T03 277 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RASSF3Q86WH2 238 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RALGPS2Q86X27 583 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SLC41A1Q8IVJ1 513 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 EFCAB13Q8IY85 973 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CMTM8Q8IZV2 173 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CHCHD4Q8N4Q1 142 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MAB21L3Q8N8X9 362 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF610Q8N9Z0 462 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TMEM161BQ8NDZ6 487 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 RPLP0P6Q8NHW5 317 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 OLIG1Q8TAK6 271 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MDM1Q8TC05 714 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 BPIFB1Q8TDL5 484 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SNX33Q8WV41 574 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ACAP3Q96P50 834 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PLIN2Q99541 437 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 SPATA5L1Q9BVQ7 753 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 FGFBP2Q9BYJ0 223 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 C22orf23Q9BZE7 217 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TM6SF1Q9BZW5 370 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ZCWPW1Q9H0M4 648 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TASP1Q9H6P5 420 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 C8orf33Q9H7E9 229 aaPredicted RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 CAAP1Q9H8G2 361 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TUFT1Q9NNX1 390 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ASAH2Q9NR71 780 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 PDRG1Q9NUG6 133 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 GCNT4Q9P109 453 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TESQ9UGI8 421 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TLK1Q9UKI8 766 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 FRMD4BQ9Y2L6 1034 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MRPS17Q9Y2R5 130 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 WNT6Q9Y6F9 365 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ACACBO00763 2458 aa3.39□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF638Q14966 1978 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 MYO18AQ92614 2054 aaKnown RBP3.39□□□□□ -1.87
SLIRP-202ENST00000553981 TCHHQ07283 1943 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 PLXND1Q9Y4D7 1925 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MYH11P35749 1972 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CNOT1A5YKK6 2376 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC169A6NNP5 214 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 K7ERI5 159 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SGK1O00141 431 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF197O14709 1029 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 DKC1O60832 514 aaKnown RBP eCLIP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ATP2C2O75185 946 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CDKL5O76039 1030 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CFIP05156 583 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MCF2P10911 925 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 HAPLN1P10915 354 aaPredicted RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CD59P13987 128 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 POU3F2P20265 443 aaPredicted RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ACAT1P24752 427 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ADSSP30520 456 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ELF1P32519 619 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 RPL9P32969 192 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MCM2P49736 904 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 NEK4P51957 841 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SLC12A3P55017 1021 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CLDN6P56747 220 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 LILRA4P59901 499 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 YWHAHQ04917 246 aaPredicted RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MCL1Q07820 350 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SEMA3BQ13214 749 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 TRIM25Q14258 630 aaKnown RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 UAP1L1Q3KQV9 507 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SLC39A12Q504Y0 691 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ARHGAP29Q52LW3 1261 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 DGKKQ5KSL6 1271 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CYP4A22Q5TCH4 519 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SPATA1Q5VX52 437 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 C9orf57Q5W0N0 161 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 WSCD1Q658N2 575 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SP5Q6BEB4 398 aaPredicted RBP3.38□□□□□ -1.87
SLIRP-202ENST00000553981 IL31Q6EBC2 164 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 JADE1Q6IE81 842 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ZNF280DQ6N043 979 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 ZBTB8OSQ8IWT0 167 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC33Q8N5R6 958 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 PNPLA1Q8N8W4 532 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 MCPH1Q8NEM0 835 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 DEPTORQ8TB45 409 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 CSGALNACT1Q8TDX6 532 aa3.38□□□□□ -1.87
SLIRP-202ENST00000553981 SLC9A6Q92581 669 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms