RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 TMEM174Q8WUU8 243 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 LPAR1Q92633 364 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 OTULINQ96BN8 352 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 ZFYVE19Q96K21 471 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 BARD1Q99728 777 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 CHCHD6Q9BRQ6 235 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 H2AFJQ9BTM1 129 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 PRKRIP1Q9H875 184 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 PLEKHA5Q9HAU0 1116 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 WDR6Q9NNW5 1121 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 TBC1D22BQ9NU19 505 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 SPATS2LQ9NUQ6 558 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 TUBA8Q9NY65 449 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 LIMA1Q9UHB6 759 aaKnown RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 FRMD4BQ9Y2L6 1034 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 FAM96BQ9Y3D0 163 aa3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.82□□□□□ -1.8
EFCAB11-204ENST00000553871 ZNF804BA4D1E1 1349 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 KDM3AQ9Y4C1 1321 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 A0A1W2PPC1 479 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 FSD2A1L4K1 749 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 ANKRD18BA2A2Z9 1011 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 NPIPB15A6NHN6 443 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 STMND1H3BQB6 276 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 SNAP23O00161 211 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 EBAG9O00559 213 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 HSPB6O14558 160 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 USO1O60763 962 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 HNRNPCL1O60812 293 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 RNASEH2AO75792 299 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 FGBP02675 491 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 ACADMP11310 421 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 ENO3P13929 434 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 AVPR1AP37288 418 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 GNAQP50148 359 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 CLCN5P51795 746 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 EIF5P55010 431 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 CDH12P55289 794 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 HDAC4P56524 1084 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 MAMLD1Q13495 774 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 RBMS2Q15434 407 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 MANEAQ5SRI9 462 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 GPATCH4Q5T3I0 446 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 DPY19L2P1Q6NXN4 242 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 MZT2BQ6NZ67 158 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 TMED8Q6PL24 325 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 CPLX2Q6PUV4 134 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 PXKQ7Z7A4 578 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 MRPL10Q7Z7H8 261 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 CADM3Q8N126 398 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 NGEFQ8N5V2 710 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 C16orf52Q8NHV5 167 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 MPLKIPQ8TAP9 179 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 NLRP4Q96MN2 994 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 FZD3Q9NPG1 666 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 EIF2B3Q9NR50 452 aaKnown RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 FBXO9Q9UK97 447 aaPredicted RBP3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 A4GNTQ9UNA3 340 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 HS3ST3B1Q9Y662 390 aa3.81□□□□□ -1.8
EFCAB11-204ENST00000553871 A0A0G2JK05 382 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 GAGE12JA6NER3 117 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 CGB1A6NKQ9 187 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 AP3D1O14617 1153 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 MDM4O15151 490 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 MTA2O94776 668 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 NDUFB8O95169 186 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 TOP3BO95985 862 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 HEXAP06865 529 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 KRT10P13645 584 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 PPARGP37231 505 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 RGS2P41220 211 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 GABRB2P47870 512 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ME1P48163 572 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 CENPAP49450 140 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ENTPD1P49961 510 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 C21orf58P58505 322 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 OLR1P78380 273 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 MRPS21P82921 87 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 TMEM115Q12893 351 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ITGADQ13349 1161 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 CAPSQ13938 189 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 EIF4A2Q14240 407 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ARHGEF6Q15052 776 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 RABEP1Q15276 862 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 CCNG2Q16589 344 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 DPCR1Q3MIW9 517 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 SLC45A4Q5BKX6 768 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 LRRC8EQ6NSJ5 796 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 FAM83HQ6ZRV2 1179 aaPredicted RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 TDRPQ86YL5 185 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 DENND6AQ8IWF6 608 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 SRRM1Q8IYB3 904 aaKnown RBP3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ADSSL1Q8N142 457 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 TMEM199Q8N511 208 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 ARFGAP1Q8N6T3 406 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 FRMD1Q8N878 549 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 GJC3Q8NFK1 279 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 SLC35F5Q8WV83 523 aa3.8□□□□□ -1.8
EFCAB11-204ENST00000553871 IGFBPL1Q8WX77 278 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms