RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PAEPP09466 180 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 RNF224P0DH78 156 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 PRKAR1AP10644 381 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 SYT1P21579 422 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 RPL13P26373 211 aaKnown RBP14.03□□□□□ -0.16
PRPF39-204ENST00000553605 COL8A1P27658 744 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 TNFRSF8P28908 595 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 CCR1P32246 355 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 CDH4P55283 916 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 PITX1P78337 314 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-204ENST00000553605 ADAM9Q13443 819 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 SEPT6Q14141 434 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 EFHC2Q5JST6 749 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 RD3Q7Z3Z2 195 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 HEATR4Q86WZ0 1026 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 UBR7Q8N806 425 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 RAB7BQ96AH8 199 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 SLC45A3Q96JT2 553 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 HEPHQ9BQS7 1158 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 ZSWIM1Q9BR11 485 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 POPDC2Q9HBU9 364 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 ST7Q9NRC1 585 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 CUEDC1Q9NWM3 386 aaPredicted RBP14.03□□□□□ -0.16
PRPF39-204ENST00000553605 GGT7Q9UJ14 662 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 TP53TG5Q9Y2B4 290 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 PCDHGA3Q9Y5H0 932 aa14.03□□□□□ -0.16
PRPF39-204ENST00000553605 SEMA7AO75326 666 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ZNF821O75541 412 aaPredicted RBP14.02□□□□□ -0.17
PRPF39-204ENST00000553605 RASGRP1O95267 797 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 PRKCGP05129 697 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 RHOCP08134 193 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 FGF3P11487 239 aaPredicted RBP14.02□□□□□ -0.17
PRPF39-204ENST00000553605 DCTP40126 519 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ABL2P42684 1182 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ARHGEF7Q14155 803 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 STILQ15468 1287 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ALG11Q2TAA5 492 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 MAP9Q49MG5 647 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 CERCAMQ5T4B2 595 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 TMEM270Q6UE05 265 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 PIM3Q86V86 326 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 CEP57L1Q8IYX8 460 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 GALNT11Q8NCW6 608 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 PMEPA1Q969W9 287 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ZSCAN16Q9H4T2 348 aaPredicted RBP14.02□□□□□ -0.17
PRPF39-204ENST00000553605 RDH14Q9HBH5 336 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 MBNL1Q9NR56 388 aaKnown RBP14.02□□□□□ -0.17
PRPF39-204ENST00000553605 LRIT1Q9P2V4 623 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 ITM2BQ9Y287 266 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 DAAM1Q9Y4D1 1078 aa14.02□□□□□ -0.17
PRPF39-204ENST00000553605 C2CD3Q4AC94 2353 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 SYNJ2BP-COX16A0A087WUM0 186 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 RNF225M0QZC1 329 aaPredicted RBP14.01□□□□□ -0.17
PRPF39-204ENST00000553605 DUX1O43812 170 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 RAD1O60671 282 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 BRD2P25440 801 aaKnown RBP14.01□□□□□ -0.17
PRPF39-204ENST00000553605 RPL34P49207 117 aaKnown RBP14.01□□□□□ -0.17
PRPF39-204ENST00000553605 PEX5P50542 639 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 DNA2P51530 1060 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CCNHP51946 323 aaPredicted RBP14.01□□□□□ -0.17
PRPF39-204ENST00000553605 YWHAZP63104 245 aaKnown RBP14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CDC20Q12834 499 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 DEFB109BQ30KR1 87 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CBWD6Q4V339 395 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CARD16Q5EG05 197 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CBWD3Q5JTY5 395 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 CBWD5Q5RIA9 395 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 OGFOD3Q6PK18 319 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 EFCAB3Q8N7B9 438 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 DCAF4L2Q8NA75 395 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 RCBTB1Q8NDN9 531 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 C1QTNF7Q9BXJ2 289 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 FAM204AQ9H8W3 233 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 PRDM8Q9NQV8 689 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 COX16Q9P0S2 106 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 COQ4Q9Y3A0 265 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 HS3ST4Q9Y661 456 aa14.01□□□□□ -0.17
PRPF39-204ENST00000553605 A0A0D9SEW6 157 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 C16orf96A6NNT2 1141 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 EFCAB7A8K855 629 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 TMEM110-MUSTN1A8MSY1 372 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 HGSO14964 777 aaPredicted RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 TM7SF2O76062 418 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 CPNE6O95741 557 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 CALCAP01258 141 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 NR1D1P20393 614 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 TBXAS1P24557 533 aaPredicted RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 GGCXP38435 758 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 ACADSBP45954 432 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 B4GALNT1Q00973 533 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 LRMPQ12912 555 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 C5orf22Q49AR2 442 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 ENPP7Q6UWV6 458 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 MAMDC2Q7Z304 686 aaPredicted RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 SRRM1Q8IYB3 904 aaKnown RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 PCDH20Q8N6Y1 951 aaKnown RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 TP53I13Q8NBR0 393 aaPredicted RBP14□□□□□ -0.17
PRPF39-204ENST00000553605 ARHGEF26Q96DR7 871 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 PAGE5Q96GU1 130 aa14□□□□□ -0.17
PRPF39-204ENST00000553605 HAPLN3Q96S86 360 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms