RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 WRAP53Q9BUR4 548 aaKnown RBP18.48■□□□□ 0.55
SHMT2-206ENST00000553529 CATSPERBQ9H7T0 1116 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 KLHL11Q9NVR0 708 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 TMEM51Q9NW97 253 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 ZMIZ1Q9ULJ6 1067 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 HPCAL4Q9UM19 191 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 CAPN11Q9UMQ6 739 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 NENFQ9UMX5 172 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 COQ6Q9Y2Z9 468 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 NEUROG3Q9Y4Z2 214 aa18.48■□□□□ 0.55
SHMT2-206ENST00000553529 TRPM6Q9BX84 2022 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 TDRD6O60522 2096 aaKnown RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 GOLGA6L19H0YKK7 550 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 TAF4O00268 1085 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 DFFAO00273 331 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 TRIM38O00635 465 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 PRPSAP2O60256 369 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 MMP20O60882 483 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 DKK1O94907 266 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 PROS1P07225 676 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 CD48P09326 243 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 TIMP2P16035 220 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 HNRNPA2B1P22626 353 aaKnown RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 SNRPD1P62314 119 aaKnown RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 MMRN1Q13201 1228 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 DPYSQ14117 519 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 ATP13A4Q4VNC1 1196 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 AFMIDQ63HM1 303 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 GDPD4Q6W3E5 623 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 PTAR1Q7Z6K3 402 aaPredicted RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 SLC25A45Q8N413 288 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 TSEN2Q8NCE0 465 aaKnown RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 KLHDC7BQ96G42 594 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 PPP1R16AQ96I34 528 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 CNDP2Q96KP4 475 aaKnown RBP18.47■□□□□ 0.55
SHMT2-206ENST00000553529 GDAP1L1Q96MZ0 367 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 NUP85Q9BW27 656 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 SLC17A9Q9BYT1 436 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 EDEM3Q9BZQ6 932 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 KLF15Q9UIH9 416 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 DMTF1Q9Y222 760 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 MSRB2Q9Y3D2 182 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 USP24Q9UPU5 2620 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 ANKRD36A6QL64 1941 aa18.47■□□□□ 0.55
SHMT2-206ENST00000553529 FFAR2O15552 330 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 PRAMEF11O60813 436 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 SERPING1P05155 500 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 GJC1P36383 396 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 ZBED6P86452 979 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 PARP15Q460N3 678 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 Q6ZSR6 202 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 CAMK1DQ8IU85 385 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 FUBP1Q96AE4 644 aaKnown RBP18.46■□□□□ 0.55
SHMT2-206ENST00000553529 TCEAL2Q9H3H9 227 aaPredicted RBP18.46■□□□□ 0.55
SHMT2-206ENST00000553529 MBNL1Q9NR56 388 aaKnown RBP18.46■□□□□ 0.55
SHMT2-206ENST00000553529 UBA2Q9UBT2 640 aaPredicted RBP18.46■□□□□ 0.55
SHMT2-206ENST00000553529 FTSJ1Q9UET6 329 aa18.46■□□□□ 0.55
SHMT2-206ENST00000553529 COL5A1P20908 1838 aaPredicted RBP18.46■□□□□ 0.55
SHMT2-206ENST00000553529 AREL1O15033 823 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 CASC3O15234 703 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 FGF10O15520 208 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 NEBLO76041 1014 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 POP4O95707 220 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 IGSF6O95976 241 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 GIMD1P0DJR0 217 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 RARAP10276 462 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 EIF4A3P38919 411 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 AIF1P55008 147 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 YBEYP58557 167 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 TPM4P67936 248 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 SLC25A11Q02978 314 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 SUZ12Q15022 739 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 PTPRRQ15256 657 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 TCEA2Q15560 299 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 SLC45A4Q5BKX6 768 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 KCTD16Q68DU8 428 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 ABI3BPQ7Z7G0 1075 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 FNIP1Q8TF40 1166 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 ANAPC7Q9UJX3 599 aa18.45■□□□□ 0.54
SHMT2-206ENST00000553529 APOBEC2Q9Y235 224 aaKnown RBP18.45■□□□□ 0.54
SHMT2-206ENST00000553529 ENC1O14682 589 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 SCAMP1O15126 338 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 DAPK3O43293 454 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 TNFSF14O43557 240 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 RNF8O76064 485 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 MAP3K6O95382 1288 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 CAPNS1P04632 268 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 AKT2P31751 481 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 IGFALSP35858 605 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 HNRNPDQ14103 355 aaKnown RBP18.44■□□□□ 0.54
SHMT2-206ENST00000553529 FZD2Q14332 565 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 CCDC122Q5T0U0 273 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 NEK5Q6P3R8 708 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 TTC7BQ86TV6 843 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 VPS36Q86VN1 386 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 PLPP6Q8IY26 295 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 MDM1Q8TC05 714 aa18.44■□□□□ 0.54
SHMT2-206ENST00000553529 ZCCHC14Q8WYQ9 949 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms