RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 AIFM2Q9BRQ8 373 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 THAP7Q9BT49 309 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 CCDC106Q9BWC9 280 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 ANKRD2Q9GZV1 360 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 HRH4Q9H3N8 390 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 TXNRD2Q9NNW7 524 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 SERTAD4Q9NUC0 356 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 GAR1Q9NY12 217 aaKnown RBP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 PSD3Q9NYI0 1048 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 PLK2Q9NYY3 685 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 NLKQ9UBE8 527 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 DKK2Q9UBU2 259 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 ANAPC2Q9UJX6 822 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 ISY1Q9ULR0 285 aaKnown RBP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 ICKQ9UPZ9 632 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 BTBD3Q9Y2F9 522 aa6.02□□□□□ -1.45
SCFD1-208ENST00000553278 AAR2Q9Y312 384 aaKnown RBP6.02□□□□□ -1.45
SCFD1-208ENST00000553278 UTYO14607 1347 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SPATA31A5Q5VU36 1347 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SPATA31A6Q5VVP1 1343 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SPATA31A7Q8IWB4 1347 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TCRBV7S3A2A0A539 114 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TRBC2A0A5B9 178 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FAM90A8PA6NJQ4 464 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TFP02787 698 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FAM90A13PP0C7W8 464 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FAM90A24PP0C7X0 464 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 ITGAMP11215 1152 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TAL1P17542 331 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TNFRSF1AP19438 455 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SP100P23497 879 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 PON1P27169 355 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 PCSK6P29122 969 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 KRT2P35908 639 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TXKP42681 527 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 ARSFP54793 590 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 ALG11Q2TAA5 492 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CRY2Q49AN0 593 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 C5orf22Q49AR2 442 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 C10orf76Q5T2E6 689 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SLC2A7Q6PXP3 512 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 DHRS13Q6UX07 377 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 LIMS2Q7Z4I7 341 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 UNC45BQ8IWX7 931 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CNPY4Q8N129 248 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF276Q8N554 614 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SYT8Q8NBV8 401 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 MCUQ8NE86 351 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 KIF18AQ8NI77 898 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SETD6Q8TBK2 473 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FAM162AQ96A26 154 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 ELMOD3Q96FG2 381 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FRG2BQ96QU4 278 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 SPAG5Q96R06 1193 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 BBS4Q96RK4 519 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 THUMPD3Q9BV44 507 aaKnown RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 C1QTNF1Q9BXJ1 281 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 KRTAP4-2Q9BYR5 136 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CIPCQ9C0C6 399 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 PLK3Q9H4B4 646 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 PDZD7Q9H5P4 517 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 RANGRFQ9HD47 186 aaPredicted RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 GRHL1Q9NZI5 618 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CTNNAL1Q9UBT7 734 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 CNOT8Q9UFF9 292 aaKnown RBP6.01□□□□□ -1.45
SCFD1-208ENST00000553278 AMACRQ9UHK6 382 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 PADI1Q9ULC6 663 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TNFSF13BQ9Y275 285 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 FAM96BQ9Y3D0 163 aa6.01□□□□□ -1.45
SCFD1-208ENST00000553278 TCRBV21S2A2A0A5A6 115 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 URADA6NGE7 173 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 LRRC72A6NJI9 287 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 H0YIZ8 118 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 MITFO75030 526 aaPredicted RBP6□□□□□ -1.45
SCFD1-208ENST00000553278 AVILO75366 819 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 TTLL1O95922 423 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 TPOP07202 933 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 FDPSP14324 419 aaKnown RBP6□□□□□ -1.45
SCFD1-208ENST00000553278 PTPN2P17706 415 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ACRV1P26436 265 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 CIITAP33076 1130 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 MMP14P50281 582 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 CYP2J2P51589 502 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 PNLIPRP2P54317 469 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 MRPS5P82675 430 aaKnown RBP6□□□□□ -1.45
SCFD1-208ENST00000553278 TFAP4Q01664 338 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 RHAGQ02094 409 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ACSM2AQ08AH3 577 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ALCAMQ13740 583 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 KCNB1Q14721 858 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 NAB2Q15742 525 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 TIGD2Q4W5G0 525 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF805Q5CZA5 627 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 PCID2Q5JVF3 399 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 COLEC12Q5KU26 742 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 VWA5B1Q5TIE3 1220 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 740.8 ms