RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 MX2P20592 715 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 TGM1P22735 817 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 ITGB7P26010 798 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 RWDD2BP57060 319 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 TAS2R38P59533 333 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PPP2CBP62714 309 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PPP2CAP67775 309 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 RAD51Q06609 339 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 TFDP2Q14188 446 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF805Q5CZA5 627 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PLA2G2CQ5R387 149 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 GDPD4Q6W3E5 623 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 B4GALNT4Q76KP1 1039 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 ERN2Q76MJ5 926 aaKnown RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 RGL4Q8IZJ4 473 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 CCNYQ8ND76 341 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 OR2T34Q8NGX1 318 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 NSMCE1Q8WV22 266 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 SNX19Q92543 992 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 HDAC11Q96DB2 347 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PPP1R16AQ96I34 528 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 LRIG1Q96JA1 1093 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 NSMCE3Q96MG7 304 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 TSGA13Q96PP4 275 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PSKH2Q96QS6 385 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 LGMNQ99538 433 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 HERPUD2Q9BSE4 406 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 HEMGNQ9BXL5 484 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 HDAC8Q9BY41 377 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 SAE1Q9UBE0 346 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PILRBQ9UKJ0 227 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 ASCC3Q8N3C0 2202 aaKnown RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 CNOT1A5YKK6 2376 aaKnown RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3DA0A087WVF3 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3IA0A087WXS9 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3EA0A087X179 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3KA0A087X1G2 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3FA6NER0 549 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 C16orf96A6NNT2 1141 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 PATE3B3GLJ2 98 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3LB9A6J9 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MATN3O15232 486 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 DDX3YO15523 660 aaKnown RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 IGHV4-34P06331 123 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3HP0C7X1 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 ADRB3P13945 408 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 CCNCP24863 283 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MMP13P45452 471 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 CSNK1DP48730 415 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 SCNN1BP51168 640 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 RENBPP51606 427 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 NEK3P51956 506 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MAXP61244 160 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 SF3A2Q15428 464 aaKnown RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 PPP2R5EQ16537 467 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 FAM182AQ5T1J6 154 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MARC1Q5VT66 337 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 KIAA0895LQ68EN5 471 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3GQ6DHY5 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3CQ6IPX1 549 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TCEAL6Q6IPX3 200 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 AADACL2Q6P093 401 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF662Q6ZS27 426 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 CAMK1DQ8IU85 385 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 CCDC13Q8IYE1 715 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TBC1D3Q8IZP1 549 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TEX26Q8N6G2 289 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MAML1Q92585 1016 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TCEAL3Q969E4 200 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 BIRC7Q96CA5 298 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 OLFM3Q96PB7 478 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 OSBPL1AQ9BXW6 950 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 CPEB1Q9BZB8 566 aaKnown RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 PCED1AQ9H1Q7 454 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 NT5MQ9NPB1 228 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 SEMA4GQ9NTN9 838 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 EIF2B4Q9UI10 523 aaKnown RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.29□□□□□ -0.12
PTCH1-226ENST00000553011 SLCO1B1Q9Y6L6 691 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 TMEM131Q92545 1883 aa14.29□□□□□ -0.12
PTCH1-226ENST00000553011 MIF4GDA9UHW6 222 aaKnown RBP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 C10orf142B7Z368 130 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 LRP3O75074 770 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 PYGMP11217 842 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 CR2P20023 1033 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 TGM2P21980 687 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 ABL2P42684 1182 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 COPS2P61201 443 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 PPIDQ08752 370 aaKnown RBP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 NSUN2Q08J23 767 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF211Q13398 564 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 HNRNPDQ14103 355 aaKnown RBP14.28□□□□□ -0.12
PTCH1-226ENST00000553011 LRRC73Q5JTD7 316 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 WDR45BQ5MNZ6 344 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 SYCP2LQ5T4T6 812 aa14.28□□□□□ -0.12
PTCH1-226ENST00000553011 TIGD7Q6NT04 549 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms