RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 ATP13A3Q9H7F0 1226 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 DKK3Q9UBP4 350 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 SEPT3Q9UH03 358 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 IPO11Q9UI26 975 aaKnown RBP13.51□□□□□ -0.25
CEP290-205ENST00000550962 SNX11Q9Y5W9 270 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 ACTL7AQ9Y615 435 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 DMXL1Q9Y485 3027 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 PI4KAP42356 2102 aa13.51□□□□□ -0.25
CEP290-205ENST00000550962 TLR4O00206 839 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 GJB3O75712 270 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 SERPINA4P29622 427 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 GJC1P36383 396 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 GRK6P43250 576 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 CSNK1DP48730 415 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 TAS2R38P59533 333 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 TBX2Q13207 712 aaPredicted RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 ZNF235Q14590 738 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 SPA17Q15506 151 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 ZNF423Q2M1K9 1284 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 ATXN7L2Q5T6C5 722 aaPredicted RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 AFMIDQ63HM1 303 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 ERAP2Q6P179 960 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 PIP4P1Q86T03 277 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 TTC7BQ86TV6 843 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 CCDC170Q8IYT3 715 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 OR2I1PQ8NGU4 316 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 SETD7Q8WTS6 366 aaKnown RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 ZNF641Q96N77 438 aaPredicted RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 KLHL32Q96NJ5 620 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 ELF4Q99607 663 aaPredicted RBP13.5□□□□□ -0.25
CEP290-205ENST00000550962 CHP1Q99653 195 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 CDC6Q99741 560 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 ZNF670Q9BS34 389 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 CALN1Q9BXU9 219 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 PDFQ9HBH1 243 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 PCDH18Q9HCL0 1135 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 SPTLC3Q9NUV7 552 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 WDR87Q6ZQQ6 2873 aa13.5□□□□□ -0.25
CEP290-205ENST00000550962 GON4LQ3T8J9 2241 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 A0A1W2PQ67 120 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 TMEM110-MUSTN1A8MSY1 372 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 GOLGA6L6A8MZA4 724 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 C10orf142B7Z368 130 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 J3KR12 359 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 SLC31A1O15431 190 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 PCDHGA12O60330 932 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 NEBLO76041 1014 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 TRIM16O95361 564 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 CD59P13987 128 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 SLC1A1P43005 524 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 AP1S1P61966 158 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 POLR2LP62875 67 aaKnown RBP13.49□□□□□ -0.25
CEP290-205ENST00000550962 NSUN2Q08J23 767 aaKnown RBP eCLIP13.49□□□□□ -0.25
CEP290-205ENST00000550962 MESDQ14696 234 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 LBRQ14739 615 aaKnown RBP13.49□□□□□ -0.25
CEP290-205ENST00000550962 CYTH1Q15438 398 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 BRAT1Q6PJG6 821 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 DCP2Q8IU60 420 aaKnown RBP13.49□□□□□ -0.25
CEP290-205ENST00000550962 ARHGAP12Q8IWW6 846 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 SLC35G2Q8TBE7 412 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 CXorf40AQ8TE69 158 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 KLHDC7BQ96G42 594 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 ZNF830Q96NB3 372 aaPredicted RBP13.49□□□□□ -0.25
CEP290-205ENST00000550962 PACSIN1Q9BY11 444 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 KLC2Q9H0B6 622 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 ERVMER34-1Q9H9K5 563 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 LHX3Q9UBR4 397 aa13.49□□□□□ -0.25
CEP290-205ENST00000550962 FNDC3AQ9Y2H6 1198 aaKnown RBP13.49□□□□□ -0.25
CEP290-205ENST00000550962 NUMA1Q14980 2115 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.48□□□□□ -0.25
CEP290-205ENST00000550962 A0A1W2PR77 199 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 A6NNZ2 444 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 SH3BP5O60239 455 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 MTA2O94776 668 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 TCF4P15884 667 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 MX2P20592 715 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 AMPD1P23109 780 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 ZNF75DP51815 510 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 NXPH1P58417 271 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 SIM1P81133 766 aaPredicted RBP13.48□□□□□ -0.25
CEP290-205ENST00000550962 BNC1Q01954 994 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 BCL2L1Q07817 233 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 ZNF284Q2VY69 593 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 TMEM259Q4ZIN3 620 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 RALGPS1Q5JS13 557 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 N4BP2L1Q5TBK1 243 aaPredicted RBP13.48□□□□□ -0.25
CEP290-205ENST00000550962 TIGD7Q6NT04 549 aaPredicted RBP13.48□□□□□ -0.25
CEP290-205ENST00000550962 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 SRLQ86TD4 932 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 NPWQ8N729 165 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 DENND6BQ8NEG7 585 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 FAM71BQ8TC56 605 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.48□□□□□ -0.25
CEP290-205ENST00000550962 ASB12Q8WXK4 309 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 EXOC2Q96KP1 924 aa13.48□□□□□ -0.25
CEP290-205ENST00000550962 CALR3Q96L12 384 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms