RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 PARS2Q7L3T8 475 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 SRLQ86TD4 932 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 NT5DC3Q86UY8 548 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 VSIG1Q86XK7 387 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 CAMK1DQ8IU85 385 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 LRRC49Q8IUZ0 686 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 SYCE1Q8N0S2 351 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZCCHC9Q8N567 271 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
TROAP-213ENST00000550709 PAF1Q8N7H5 531 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 C12orf50Q8NA57 414 aaPredicted RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 RBM41Q96IZ5 413 aaKnown RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 LRIG1Q96JA1 1093 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 LGMNQ99538 433 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 HDAC8Q9BY41 377 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PCED1AQ9H1Q7 454 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 LZTFL1Q9NQ48 299 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 FSCN3Q9NQT6 498 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 SAE1Q9UBE0 346 aaPredicted RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 AMFRQ9UKV5 643 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.92□□□□□ -0.18
TROAP-213ENST00000550709 TTLL3Q9Y4R7 772 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 PCDHA3Q9Y5H8 950 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 SLCO1B1Q9Y6L6 691 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 CAPN6Q9Y6Q1 641 aa13.92□□□□□ -0.18
TROAP-213ENST00000550709 FANCMQ8IYD8 2048 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 CCDC66A2RUB6 948 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 KHNYNO15037 678 aaKnown RBP13.91□□□□□ -0.18
TROAP-213ENST00000550709 SLC7A4O43246 635 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 KRT86O43790 486 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 LRP3O75074 770 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 NEBLO76041 1014 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 PCDH8O95206 1070 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 IGHV4-34P06331 123 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 ADRB3P13945 408 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 GNSP15586 552 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 CTNNA2P26232 953 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 RENBPP51606 427 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 RWDD2BP57060 319 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 MAXP61244 160 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 IRX4P78413 519 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 ADCY2Q08462 1091 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 ITKQ08881 620 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 TAZQ16635 292 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 AASDHQ4L235 1098 aaPredicted RBP13.91□□□□□ -0.18
TROAP-213ENST00000550709 TRIM61Q5EBN2 209 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 TFDP3Q5H9I0 405 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 FAM182AQ5T1J6 154 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 PRR23CQ6ZRP0 262 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 TTC7BQ86TV6 843 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 BBS5Q8N3I7 341 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 EXD1Q8NHP7 514 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 DNASE2BQ8WZ79 361 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 ALG3Q92685 438 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 KLK6Q92876 244 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 VOPP1Q96AW1 172 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 HAUS1Q96CS2 278 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 NT5MQ9NPB1 228 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 RXFP3Q9NSD7 469 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 RBM22Q9NW64 420 aaKnown RBP eCLIP13.91□□□□□ -0.18
TROAP-213ENST00000550709 SEPT10Q9P0V9 454 aa13.91□□□□□ -0.18
TROAP-213ENST00000550709 NUMA1Q14980 2115 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 hCG_1818297A0A087WSY0 165 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 KCNK1O00180 336 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 NEMP1O14524 444 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 MATN3O15232 486 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 RNGTTO60942 597 aaKnown RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 JCHAINP01591 159 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 PECAM1P16284 738 aaPredicted RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 XPAP23025 273 aaPredicted RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 CCNCP24863 283 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 DPP6P42658 865 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 PEX5P50542 639 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 AP1B1Q10567 949 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 GSE1Q14687 1217 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 PDK1Q15118 436 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 DUOXA1Q1HG43 343 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 CFAP58Q5T655 872 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 CCDC181Q5TID7 509 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 TIGD7Q6NT04 549 aaPredicted RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 AADACL2Q6P093 401 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 CCDC13Q8IYE1 715 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 RNF10Q8N5U6 811 aaKnown RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 GPR161Q8N6U8 529 aaKnown RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 FAM131CQ96AQ9 280 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 TSGA13Q96PP4 275 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 CPEB1Q9BZB8 566 aaKnown RBP13.9□□□□□ -0.18
TROAP-213ENST00000550709 SUV39H2Q9H5I1 410 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 ATP13A3Q9H7F0 1226 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 NOD2Q9HC29 1040 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 ITM2BQ9Y287 266 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 PPP2R2CQ9Y2T4 447 aa13.9□□□□□ -0.18
TROAP-213ENST00000550709 A0A1W2PQU0 124 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 BCAT2O15382 392 aaPredicted RBP13.89□□□□□ -0.19
TROAP-213ENST00000550709 GDF9O60383 454 aa13.89□□□□□ -0.19
TROAP-213ENST00000550709 PYGMP11217 842 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms