RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 KCNJ9Q92806 393 aa6.51□□□□□ -1.37
TGFBR1-208ENST00000550253 EPHX3Q9H6B9 360 aa6.51□□□□□ -1.37
TGFBR1-208ENST00000550253 CWC25Q9NXE8 425 aaPredicted RBP6.51□□□□□ -1.37
TGFBR1-208ENST00000550253 HDAC6Q9UBN7 1215 aa6.51□□□□□ -1.37
TGFBR1-208ENST00000550253 EYSQ5T1H1 3165 aa6.51□□□□□ -1.37
TGFBR1-208ENST00000550253 EIF2S1P05198 315 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 IL6RP08887 468 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PRPH2P23942 346 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 MTNR1AP48039 350 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 FAM189BP81408 668 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 EFNB1P98172 346 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SREBF2Q12772 1141 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 LRMPQ12912 555 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 GPR139Q6DWJ6 353 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 G2E3Q7L622 706 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 TMEM151BQ8IW70 566 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SCN4BQ8IWT1 228 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 B3GALNT2Q8NCR0 500 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 RAB40AQ8WXH6 277 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 LPIN2Q92539 896 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 FAM84AQ96KN4 292 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 DEFB129Q9H1M3 183 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 OR10A4Q9H209 315 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PDE7BQ9NP56 450 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PPP4R1LQ9P1A2 415 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 FANCIQ9NVI1 1328 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 A0A1W2PQ09 198 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 CLRN2A0PK11 232 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 UBE2CO00762 179 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SCAF4O95104 1147 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 HSPA4LO95757 839 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 RHOP08100 348 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 CDH2P19022 906 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 MATN1P21941 496 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PBX3P40426 434 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 EIF2DP41214 584 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 RPS6KA3P51812 740 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PSMC6P62333 389 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 NEXNQ0ZGT2 675 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 ALKBH1Q13686 389 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 IRF3Q14653 427 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SPDYE7PQ495Y7 208 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 TTI2Q6NXR4 508 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 Q6ZSN1 163 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 ARMC9Q7Z3E5 817 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SCML4Q8N228 414 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 ENDOVQ8N8Q3 282 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 KCTD6Q8NC69 237 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 XAGE5Q8WWM1 108 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 ARHGEF2Q92974 986 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 FUBP1Q96AE4 644 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 KLHL29Q96CT2 875 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 CNDP2Q96KP4 475 aaKnown RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 PRMT6Q96LA8 375 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 HTATIP2Q9BUP3 242 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 HDHD5Q9BXW7 423 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 COA1Q9GZY4 146 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 SIL1Q9H173 461 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 TTC12Q9H892 705 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 CCDC177Q9NQR7 707 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 EHD2Q9NZN4 543 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 MGAT4CQ9UBM8 478 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 MORF4L1Q9UBU8 362 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 CHORDC1Q9UHD1 332 aaPredicted RBP6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 VPS4AQ9UN37 437 aa6.5□□□□□ -1.37
TGFBR1-208ENST00000550253 ZNF804BA4D1E1 1349 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 MYO3BQ8WXR4 1341 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 A0A0C4DFX4 3053 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 FAM237BA0A1B0GVD1 139 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 FRMD3A2A2Y4 597 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 C16orf96A6NNT2 1141 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 MYO1GB0I1T2 1018 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 BCAT2O15382 392 aaPredicted RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 OR2C1O95371 312 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ITPKBP27987 946 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 GCH1P30793 250 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 NF2P35240 595 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 PPARGP37231 505 aaPredicted RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ITIH3Q06033 890 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 BYSLQ13895 437 aaKnown RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ZNF667Q5HYK9 610 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 CDC73Q6P1J9 531 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 MTFR2Q6P444 385 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 GJB7Q6PEY0 223 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 TMEM88Q6PEY1 159 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 PTCHD4Q6ZW05 846 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 APOBEC3FQ8IUX4 373 aaKnown RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 TEX11Q8IYF3 940 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ADGRF2Q8IZF7 708 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 PI4KAP1Q8N8J0 262 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 CXorf38Q8TB03 319 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 MYCBPAPQ8TBZ2 947 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 CNOT9Q92600 299 aaKnown RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 INTS12Q96CB8 462 aaKnown RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 KLHL15Q96M94 604 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 SMARCAD1Q9H4L7 1026 aa6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ZNF768Q9H5H4 540 aaKnown RBP6.49□□□□□ -1.37
TGFBR1-208ENST00000550253 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms